Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1781 |
Symbol | |
ID | 4007726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 1398852 |
End bp | 1399925 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637950912 |
Product | hypothetical protein |
Protein accession | YP_553537 |
Protein GI | 91778329 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 0.568147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000000964145 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCTGAAGA GACTTCTGGC GGGATGGCTG GGGCTGGCGC TGATGGTCGT ATCTTCGCTG GCTTGCGCGG AGCCGGCGCA TTACAAGATC GTCACCGGTC CGGAACGGGG CACGTATATC CAGATCGGCC AGGATCTGTC GAAATGGGTT GCGCAGCCGG TGGGCATCGA CCTGGAAGTG ATGGCGTCGA AGGGCTCGGC CGAAAACGTG CAACGCATGC GCTTCGAGCC GGGCGTGAAG CTCGCGCTGG TGCAATCCGA CGTGTATCAG GCTTACATCG ACATGGCCAA CGCCGGCAAT GCCGATGCGG GCACGGCGAT CCGGCCGCTA CGGCTCATCA TGCCGCTCTA TGACGAGGAA ATTAACGTCG TGGTGCGCGC GGACTCGCCG CTAAAAACGT TCGCCGACAT CAAGGACAAA AGCATCAGCG TCGGACTGAT CGGCAGCGGC ACCGCGCAGT CAGCCACGAC GCTCTACCAC CTGATGTTCG GCCAGGCCAT TCCCGAGCAG AACATCCAGC ATCTGAGCAA CGAGGACGCG CTGGCCGCGT TGATCGTCAA GAAGGTGGAC GTCGCGATCA TCGTGGTCGG CCAGCCGGCG AAACTGTTCA ACGACATGAA CCCCGAGCTG CTGCAACAGA TCCGCCTGCT GAAAGTCGAC CCGGCCGCGC CCGAAACCGC CCGCGCCAAA CAGACCTATT TTCCCGCGAC GATCCGCGCC ACCAGCTATC CTAACTGGCT GAAGGAAGAC GTTCCCACGC TGACCGTCAA GGCCTTTCTC GTCACCTACG ATTACGGTCT GCGCGACACC GTCGGCAATC TGAATCACTT TGCCGATTCG CTGTGCGCCA ACTTCGACAA TCTGCAGGAG CACGGACATC CGAAGTGGAA GCAGGTGAAG CTGGAGTTGC CGACTCTCGT GCGCGGATGG AAATACTATG CGCCGGTCGA AAAGCATCTG CGTGCGTGCC TTGCGAACAA GAGCGCCGCG ATCAGCGCCA CGGCGGCCCA GGCCGCGCCG AAACCACGCT CGACGTGCTC GGACCAGGAG CGCCTGCTTC TGCTCTGCAA GTAG
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Protein sequence | MLKRLLAGWL GLALMVVSSL ACAEPAHYKI VTGPERGTYI QIGQDLSKWV AQPVGIDLEV MASKGSAENV QRMRFEPGVK LALVQSDVYQ AYIDMANAGN ADAGTAIRPL RLIMPLYDEE INVVVRADSP LKTFADIKDK SISVGLIGSG TAQSATTLYH LMFGQAIPEQ NIQHLSNEDA LAALIVKKVD VAIIVVGQPA KLFNDMNPEL LQQIRLLKVD PAAPETARAK QTYFPATIRA TSYPNWLKED VPTLTVKAFL VTYDYGLRDT VGNLNHFADS LCANFDNLQE HGHPKWKQVK LELPTLVRGW KYYAPVEKHL RACLANKSAA ISATAAQAAP KPRSTCSDQE RLLLLCK
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