| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1133 |
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| Symbol | |
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| ID | 5134690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 1100756 |
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| End bp | 1101811 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640531455 |
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| Product | immunogenic protein |
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| Protein accession | YP_001215969 |
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| Protein GI | 147671961 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAAACGG TACAGCATCG AAAAATAATC ACAACATGGA GAGTCACGAT GAAACAAAAG
CGCCTTACGC AAACCCTATT AGCCGCCATC ACTTCGTTTG GTTTAATCGG TGGAGCTTAC
GCAGCCGAAG AACGCAGCTA CATTCTTGCC ACCGCGTCAA CCGGAGGAAC TTATTACCCC
GTAGGTGTAG CTCTGGCGAC CCTGACCAAA GTCAAACTCA CCCCGAGCTA CCACTTTTCA
CTCTCCGCGA TTAGCTCGGC TGGATCGGGT GAAAACGTGA AGTTGATGAA CGATAACGAA
GCCCAGTTCG CGATTTTGCA AGGTTTGTAC GGTGCTTGGG CATGGGCGGG CGAAGGCCCG
TATGCGGAGC GTCAAAACCA ATTGCGTTCC GTCTCTATGC TGTGGCAGAA CGTGGAGCAC
TTTATTGTGC GCTCTGATCT CGCGCCAACC GGCACCATTG CCGATCTGGC CAGCATGAAA
GGGAAAAAGT TTTCGATTGG TTCGAAAAAC TCAGGCACGG AATTTTCTGG TCGGCAGATC
ATGAAAGGGG TTGGCGTTGA CCCGGATACC TTTAATCTGG CTTATTTGGG TTACGGCGGC
AGTGCTAGTG CGCTGCAAAA TGGCACCATT GACGGCATGA ACACGCCAGC GGGTGTGCCC
GTGGGCGCGG TGACTCAAGC TTTTGCAGCG ATGGGCAACG ACATCAAGAT CCTCTCTTTT
ACCGATGAGC AGATCAAACA AGCCAACGGT AACTACAATT TGTGGACCAA GTTTGATATT
CCGGCGAACA CCTATCCGGG CGTCGATAAA ACCATCACCA CCATTGCTCA GCCGAACTTC
CTCGCGGTGC GCACCGACAT TTCGGAAGAG GATGTATATC AGCTCACTAA AGCCATGTAC
GAGAACTTAG CTTTCCTACA AGGCATCCAC AAAGCGACCA AAGATATGGC GATTGAAAAA
GCCATCGAAG GCTTGCCCAT GCCACTGCAC GCCGGTGCGG CGCGTTACTA CCAAGAAGTG
GGGATTAAAA TTCCAGCTCA CTTGATGCCA CAGTAA
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| Protein sequence | METVQHRKII TTWRVTMKQK RLTQTLLAAI TSFGLIGGAY AAEERSYILA TASTGGTYYP
VGVALATLTK VKLTPSYHFS LSAISSAGSG ENVKLMNDNE AQFAILQGLY GAWAWAGEGP
YAERQNQLRS VSMLWQNVEH FIVRSDLAPT GTIADLASMK GKKFSIGSKN SGTEFSGRQI
MKGVGVDPDT FNLAYLGYGG SASALQNGTI DGMNTPAGVP VGAVTQAFAA MGNDIKILSF
TDEQIKQANG NYNLWTKFDI PANTYPGVDK TITTIAQPNF LAVRTDISEE DVYQLTKAMY
ENLAFLQGIH KATKDMAIEK AIEGLPMPLH AGAARYYQEV GIKIPAHLMP Q
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