Gene M446_5709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5709 
Symbol 
ID6135174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6266779 
End bp6267924 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content69% 
IMG OID641645819 
Producthypothetical protein 
Protein accessionYP_001772433 
Protein GI170743778 
COG category[R] General function prediction only 
COG ID[COG2358] TRAP-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00407946 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCCGTCG TGGTGGCCGT GGCCGCGCTC ATCGCGGCCG TGCCGAGTGG CCGGGCCGAG 
GCCCCGTCCG GCCGGAAGGG GCGGCCGGCG GAGAGCTTCG CCGCCCGCAG CGAGCGCGCC
AATTCCGGCG TCGTCACGGT CATCTCCGGC ACCGTGTCCG GGACCTTCAT CCAGATCGCG
AACGACCTCT CGTTCGTCCT CGACGACGGC GACGCGCTGC GCATCCTCCC GGTCATCGGC
AAGGGGGCGG ACCAGAACCT TCGCGACATC CTCATGCTCC GGGGGATCGA CCTCGGGATC
GTGCGCTCGG ACGGCCTGGA GGCCCTTCGC CGGGATGCGC AACTCGGCGG CGCGGCCAAG
TCGCTGACCT ACATCGCGCG CCTGTTCACC GACGAGGCCC ACCTCATCGC CGGGCCGGAC
ATCACCAACA TCCGTCAGCT CGCCGGCAAG ACGGTGAACT TCGACCTTCA GGGCAGCGGC
GCCAACTATA CGGGCCGCCT GATCTTCGAG CTGCTCGGCA TTCCGGTGGT GGCGACCAAC
TACGACCAGC TGACCTCCTA CGAGATGCTG AAGAGCGGCG AGATCGCGGC GACGTTCCAG
ATGTCCGGCA AGCCCATCCC GGCCGTCGCG AAGCTCGACG CCGCGAACCG GTTCCACCTG
CTGGAGGTCC CGTTCGACCA GAAGATCGCG GAACTCTACC TCCCGGGCGA GTTCACGCAC
GAGGATTACC CGAACCTCGT TCCCGGCGGG CCGGTCAAGA CGGTCACGGT CAGCTCGATC
CTCGCCGCCT ACAACTGGCC GGAGAAGAGC GACCGGTACC AGAAGATCGC GCGGTTCACC
GAGGCGTTCT TCTCCAAGAT CGCGGCGTTC CAGCAGCCGG CGCGTCATCC GAAATGGGCC
GAGGTCAATC TCGCGGCGGA GATTCCCGGG TGGACGCGGT TCAAGGCGGC CCAGCAATGG
CTCGACAGGA ACAGGCCGAG CGAGGCCGCC GGCCCCGACG CCGAGAGCCG GGCCTCGTTC
AACAGGTTTC TCGACGCGAG GGGTCGGGCG GACGCCGCCG CGGAGGACCG CGAGGCGCTG
TTCCGCGACT TCGTGCGGTG GCAGCGGCGA GCGCAGGGCG CCAAGGACGA GGGACGTGAG
CGATGA
 
Protein sequence
MSVVVAVAAL IAAVPSGRAE APSGRKGRPA ESFAARSERA NSGVVTVISG TVSGTFIQIA 
NDLSFVLDDG DALRILPVIG KGADQNLRDI LMLRGIDLGI VRSDGLEALR RDAQLGGAAK
SLTYIARLFT DEAHLIAGPD ITNIRQLAGK TVNFDLQGSG ANYTGRLIFE LLGIPVVATN
YDQLTSYEML KSGEIAATFQ MSGKPIPAVA KLDAANRFHL LEVPFDQKIA ELYLPGEFTH
EDYPNLVPGG PVKTVTVSSI LAAYNWPEKS DRYQKIARFT EAFFSKIAAF QQPARHPKWA
EVNLAAEIPG WTRFKAAQQW LDRNRPSEAA GPDAESRASF NRFLDARGRA DAAAEDREAL
FRDFVRWQRR AQGAKDEGRE R