| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0358 |
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| Symbol | |
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| ID | 4711318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 415043 |
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| End bp | 416020 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639854821 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_001001954 |
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| Protein GI | 121997167 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0105489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATCA AGACCTGGAA CATTGCCATC TGCGCCACCT CGGCGCTGGC GCTCTCGGCG
CCGGCCCTGG CCGACCGCGA CGACTGGCCG CGCAGCTTCA CCGTGGGCAC CGCCAGCCAG
GGCGGCACCT ACTACATCTA CGGCAGCGGC TGGGCCGATA TGGTCGCCGG TATGCTCGAC
GTCCGCGCCG GCGGCGAGGT CACTGGCGGG CCGGTGCAGA ACGCCACCCT GGTGGAGACC
GGCGACCACG AGTTCGGCCT GGTGACCATG GGGCCGGCCC GCGCCGCCTG GGACGGCGAG
AGCGAACTCG CCCCCGGCAT GGAGCACAAG AACATCCGCG CGGTCTTCCC GATGTACCAG
ACCACCTTCC ACATCATCAC CCGCGAGGGC GATGACCTCA CCTCCATGGA GGATCTGGAA
GGCAAGCGCG TCGGGGTGGG GCCGTCCGGC GGCACCGCCG ACATGTACTT CCCGCAGTTC
TTCGATGAGC TGGGCATCGA TGTGCGCGTG CGCAACGGCG GCGCCTCGGA CCTCGCCGGG
CAGCTGCAGG ACGGGCTGAT CGACGCCTTC GCCTTCGCCG CGGGCACCCC GATCTCGGCG
TTCTCGCAGC TCGAGGCGGA GATCGACACC AACATCTTCT CGGTCACCGA GGCGCAGCAG
GAGCAGCTGC TGGAGGCCTT CCCGGCCCTG GCACCGGCGG ACATCGAGGC GGACCTGTAC
GGCTCCCTGG ATGAGGATAC GCCGGCGATC TCCATCTGGA ACTTCGCCAT CACCCACCAG
GACATGCCCG AGTCGCTGGT CTACGAGGTG ACCAAGGCGG TCATGGAGAA CCACGACCGG
ATGATGGACA TCCACCGGGC CGCCCGCGAG ACCCTGCCGG AGAACCACGA GTTCAACGAC
TGGATGCCCT GGCACCCGGG CGCCGTGCGC TGGTTCGAGG AGAACGGCTA CGAGATCTCC
GAAGACCTGC GCGGCTGA
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| Protein sequence | MRIKTWNIAI CATSALALSA PALADRDDWP RSFTVGTASQ GGTYYIYGSG WADMVAGMLD
VRAGGEVTGG PVQNATLVET GDHEFGLVTM GPARAAWDGE SELAPGMEHK NIRAVFPMYQ
TTFHIITREG DDLTSMEDLE GKRVGVGPSG GTADMYFPQF FDELGIDVRV RNGGASDLAG
QLQDGLIDAF AFAAGTPISA FSQLEAEIDT NIFSVTEAQQ EQLLEAFPAL APADIEADLY
GSLDEDTPAI SIWNFAITHQ DMPESLVYEV TKAVMENHDR MMDIHRAARE TLPENHEFND
WMPWHPGAVR WFEENGYEIS EDLRG
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