| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_0528 |
|---|
| Symbol | |
|---|
| ID | 7306023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 594136 |
|---|
| End bp | 595299 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643598306 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002495872 |
|---|
| Protein GI | 220920571 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGAA AGCGCGCCAG GATCTTCACG ACGGCCGCCT TGTGCGTTCT CAGCATCGGC
TGGACAGCCG GCTCGGTCGC AGTCGCCCGT GATCAAACCC AGAGTTCCAA CAGCGCCACG
GCCAGCGACA AGCTCGAAAC CGAGGCGGCC ATCACCGATC ACATGAATTC CTCCACCGTG
TCCATCATCA CCGGCACGCC GGGAGGCACC TATTTCCGCA TCGGGGCAGA TCTTGCCTTC
GTGCTGGACG ACGACAGCAA GCTGCGCATC CTGCCGATCC TGGGCAAAGG AGCCGGCCAG
AATGCCTACG ATCTGCGCTT TCTGAAGGGA GTCGATCTCG CGTTTCTGAG AACCGATACG
CTTGAGCAGC TTCGACAAGA CAAACGCCTC TCCAGAATTG AATACCACAT TCACTATATT
GCAAAGCTGT TCGATGATGA ACTTCATGTC ATTGGACCGA ACGACATCAC CGATGCTCGG
CAGCTGGCGG GCAAGAAAGT GACCTTCGAC GTCAAAGGGA GCGGCACCGA TTACAGCGGC
AAAGCGATGT TCCGCAACCT TGGGATTTCC GTGCAGGCAA TCAATGTCGA CCAACCAACC
GCATTTGAGA TGTTGCGAAA GGGCGAAGTC GACGCCGTCG TTTCAGTGGC TGCAAAGCCG
GTGGCCGTGG TCGCGAATTT CGATCCAGCC GATAAATTTC ACCTCATCCC GGTGAAATAC
TCGGAGTCGA TAAACGAGTC TTACGCGCCA GCATCTATCT CAAAGAAGGA TTATCCCAAG
CTGATCAAGG ACGATGGGCA AGTCGAAACA CTGGCGGTCG GCACGGTGCT CGGTGTCTAC
AACCACCCGA AAGGATCCTT CCGTTACAAG AAACTGTCTC GTTTCGTGGA ATCCTTCTTC
AGCCGGTTCG ACGAGTTCCT CTCCCCGCAG CGCCATCCGA AATGGCGCGA GGTCAACCTC
GCGGCCGAAG TGAGCGGGTG GACGCGGTTC CGGCCCGCCC AGGACTGGCT CGACAGCCAG
CGCGAGCATC AGGTTTCATC CAACGACAAT CTTACCAAGT TCTTGAACGA GCAGCAGCCA
GGTGCAGCAA CCGACAAGGA AGAGCTTTAT CAGGCCTATT TGAAATGGCG GAACGCCCGT
CGAAACACGA CCAGCGGCCT GTAG
|
|---|
| Protein sequence | MDRKRARIFT TAALCVLSIG WTAGSVAVAR DQTQSSNSAT ASDKLETEAA ITDHMNSSTV
SIITGTPGGT YFRIGADLAF VLDDDSKLRI LPILGKGAGQ NAYDLRFLKG VDLAFLRTDT
LEQLRQDKRL SRIEYHIHYI AKLFDDELHV IGPNDITDAR QLAGKKVTFD VKGSGTDYSG
KAMFRNLGIS VQAINVDQPT AFEMLRKGEV DAVVSVAAKP VAVVANFDPA DKFHLIPVKY
SESINESYAP ASISKKDYPK LIKDDGQVET LAVGTVLGVY NHPKGSFRYK KLSRFVESFF
SRFDEFLSPQ RHPKWREVNL AAEVSGWTRF RPAQDWLDSQ REHQVSSNDN LTKFLNEQQP
GAATDKEELY QAYLKWRNAR RNTTSGL
|
|---|
| |