| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0245 |
|---|
| Symbol | |
|---|
| ID | 5151737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 254213 |
|---|
| End bp | 255388 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640555270 |
|---|
| Product | TRAP-type uncharacterized transporter domain-containing protein |
|---|
| Protein accession | YP_001236447 |
|---|
| Protein GI | 148251862 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGTC TTTTTGGAGC GGCCGTTGCC GCCATCGTCC TCGCGCTCGG TTTTTCTGCC
CATGCCGAGG AGAGCGAATT CGATCCCGCC AAGGTCAGCG ACAGCCTGAA GGCGATCTTC
CAGTTCGGCT CGGTGCAGAC CAAGCAGGCT TTGAACGCCA ACACGGTGAC GCTGATCACC
GGCACGATCG GCGGCACCTA TGTGCAGTTC GGCGCCGACC TCGCCTCCCT GCTGGATGAC
GGCAACAATC TGCGCGTTCT GCCGATCGTC GGCCGCGGCT CGGTACAGAG CGTGGCCGAC
ATCCTGTTCC TGCAGGGTGT CGACCTCGGC GTCGTCCGCG CCGACACGCT GGACTATCTG
GAGCGCAAGG GCTTCGCCAA GGACATCAAG AAGCAGTTCA CCTACGTCAC CAAGCTCTAC
AATGAGGAGA TGCAGGTGAT CGCGCCGCGT GCGGTGCGCA ATCTGCGTGA CCTCGAAGGC
CGCCGTGTCA GCGTCGACCT GCCCAATGGC GGCACCTTCG TGACCGCGCT GACCGTGTTC
GAACGGCTCG GCCTGCGGGC GAACTTCCTC TATATCGAGC AGCGCATCGC GATGGAGAAG
CTGAAGCGCG GCGAGCTCGA CGCCGTCATC GTCGTCGGCG GCAAGCCCTA CAAATCGGTC
AGCAACTTCG TGAATGACGG CCGCTTCCAT CTCGTCAATG TGGATTACGA CCGGCCGCTG
CAGAACGACT ATCTCCCGGC GACCTTGACC GCGAAGGACT ATCCGAACCT GATCGCCGAG
GGCGAAAAGG TGGATACGAT CGCAGTGCCG GCGGTGCTCG CGGCCTACAA TTGGGCGCCG
AACACCGATC GTTATCGCAA GCTCGCGACC TTCGTCGATG CGTTCTTCAC AAAGTTTCCG
GCGTTCCAGA ATCCGCCCTT CCATCCGAAG TGGAAGGAAG TCTCGCTCTC GGCGCCGCTC
GCGGGCTGGC AGCGTCTTCC CTCGGCGAGC AAATGGCTCG AGAGCCACGC GATGGAAGGC
GCCCAGCGCG ATCGCTTCGA CGACTTTCTG AAGCAGAGCA ACGCCGGCAA GAACCTCCAG
AGCGACGCCG AGCGGGAAGC CCTGTTCAAG CAGTATCAGG CCTGGGAGGC CGAAAAGACC
GGCAGCGCCC GCGCCCAGGC TCGGGGACAG CGCTGA
|
|---|
| Protein sequence | MRRLFGAAVA AIVLALGFSA HAEESEFDPA KVSDSLKAIF QFGSVQTKQA LNANTVTLIT
GTIGGTYVQF GADLASLLDD GNNLRVLPIV GRGSVQSVAD ILFLQGVDLG VVRADTLDYL
ERKGFAKDIK KQFTYVTKLY NEEMQVIAPR AVRNLRDLEG RRVSVDLPNG GTFVTALTVF
ERLGLRANFL YIEQRIAMEK LKRGELDAVI VVGGKPYKSV SNFVNDGRFH LVNVDYDRPL
QNDYLPATLT AKDYPNLIAE GEKVDTIAVP AVLAAYNWAP NTDRYRKLAT FVDAFFTKFP
AFQNPPFHPK WKEVSLSAPL AGWQRLPSAS KWLESHAMEG AQRDRFDDFL KQSNAGKNLQ
SDAEREALFK QYQAWEAEKT GSARAQARGQ R
|
|---|
| |