| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6916 |
|---|
| Symbol | |
|---|
| ID | 5150742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 7243393 |
|---|
| End bp | 7244655 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640561598 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001242709 |
|---|
| Protein GI | 148258124 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.633643 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGAA CGCCCGCTGG TCCAGCGCTG ATCGCGCTGG CGCTGACCTC TGCTGTCTTG
TTCACTGCCG GGCCCGTGGC GCTGGCTCAG GATCTCATCA GGGATCAGCC TGCGACGCCG
CTCTCCCTCA AGCCCGCCCG CACGGCGGAA CGACGGGCTG TCGAGCCTCG GGCCGCGCAG
GCGCGTGTGC CCGAGCCACA CAGCGCAGCG GACGAAACCG CGACCAAGAC GCGCATGAAC
CAATGGACCG TCGGCCTCGC CGCGGGCCTG CCCGATGGCG GCTTCGTGCG CTTCGCCAGC
GAGATGGCGC GGACGATGGA TGACGGCGAC AATATGCGCC TGATTCCGAT GGTGACGCGC
GGCACGACGT CGAACATCGC CGACCTGCTC TATCTGCGCG GCGTCGACGT CGCGATCACC
TATGCCGATG CGTTCGACTT TTATGTGAGG CAGGCCGGGC TCGCCAACAT CAACGACCGC
ATCCGCTATG TGCTGCGATT CTTCATCTCC GATGTGCATA TCTATGCACG CAATGAGTTC
AAGTCGCTGC AGGATCTCAG AGGCCAGAAG ATTGCGGTCG GCACGGCCGG CGTCGCCGCG
GCGCATACCG GCCCGCTGAT CTTCCGGCGA CTTGGCATCG ACATCGAGCC GGTCGCGGTT
GGCGGACCGG TCGCGCTGGA GAAGCTGCAC AAGGGCGAGA TTGCGGCGAT GGTCTATGTC
GCCTCGAAGC CGGGCGAGGT GTTCAGCAGC ATGAAGGCGG CCGACCCGGG CTTTCACTTC
GTGCCGATCC CCTACACCAG CCAGTTCTCG GACTTCTATT ATCCCACGGC GATCAAGGCC
GAGACCTATC CGGCGCTGCT CGCGCCAGAT ACCTCGATCG AGACGATCGC GGTCCCTTCG
GTGCTCGCCG TCTACAATTG GAAGCCCGGC AGCGACCGCG CCGACCGCGT CAACCGTTTC
GTCGAGACGC TGTTCACCAA CCTCGCCCGC CTGCAGCAGC CGCCGTTTCA TCCGGGCTGG
AAGGATCTCA ATCTCGACGC CCAGGTGCCG GGCTGGCAAC GCTATCCCTA CGTCGAGACG
GTGCTGGAGC GCATGAGGAA GGAAGCCGAT GTCGGCCTGC CGCCGGCCGC AACCGGCAGC
CTGTCGCAAC AGGAGCGCTT CGAGGCGTTC CTGGCCTCGC AGGCCAAGGC GCCGACGACG
AAGGCCGAGA AGGAGGAGCT GTATCGCTCG TTCCTGGACT GGAGCCGCAA ACGTCAGAAG
TGA
|
|---|
| Protein sequence | MRRTPAGPAL IALALTSAVL FTAGPVALAQ DLIRDQPATP LSLKPARTAE RRAVEPRAAQ
ARVPEPHSAA DETATKTRMN QWTVGLAAGL PDGGFVRFAS EMARTMDDGD NMRLIPMVTR
GTTSNIADLL YLRGVDVAIT YADAFDFYVR QAGLANINDR IRYVLRFFIS DVHIYARNEF
KSLQDLRGQK IAVGTAGVAA AHTGPLIFRR LGIDIEPVAV GGPVALEKLH KGEIAAMVYV
ASKPGEVFSS MKAADPGFHF VPIPYTSQFS DFYYPTAIKA ETYPALLAPD TSIETIAVPS
VLAVYNWKPG SDRADRVNRF VETLFTNLAR LQQPPFHPGW KDLNLDAQVP GWQRYPYVET
VLERMRKEAD VGLPPAATGS LSQQERFEAF LASQAKAPTT KAEKEELYRS FLDWSRKRQK
|
|---|
| |