More than 300 homologs were found in PanDaTox collection
for query gene Acid345_2402 on replicon NC_008009
Organism: Candidatus Koribacter versatilis Ellin345



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008009  Acid345_2402  response regulator receiver protein  100 
 
 
133 aa  269  9e-72  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3458  multi-sensor signal transduction histidine kinase  37.78 
 
 
958 aa  69.7  0.00000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2668  response regulator receiver protein  32.5 
 
 
675 aa  67.8  0.00000000004  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1273  multi-sensor signal transduction histidine kinase  34.96 
 
 
556 aa  67.4  0.00000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.12815  normal  0.758765 
 
 
-
 
NC_010512  Bcenmc03_6441  response regulator receiver modulated metal dependent phosphohydrolase  35.83 
 
 
470 aa  67.4  0.00000000007  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007412  Ava_C0156  multi-sensor hybrid histidine kinase  35.54 
 
 
720 aa  66.6  0.0000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1210  response regulator receiver protein  30.77 
 
 
146 aa  66.2  0.0000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.680445  normal  0.444345 
 
 
-
 
NC_008062  Bcen_5575  response regulator receiver modulated metal dependent phosphohydrolase  35.83 
 
 
472 aa  65.9  0.0000000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_5939  response regulator receiver modulated metal dependent phosphohydrolase  35.83 
 
 
472 aa  65.9  0.0000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.862183 
 
 
-
 
NC_007510  Bcep18194_A4252  two component, sigma54 specific, Fis family transcriptional regulator  36.67 
 
 
461 aa  65.1  0.0000000003  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_1098  two component, sigma54 specific, Fis family transcriptional regulator  36.67 
 
 
461 aa  65.1  0.0000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_1140  two component, sigma54 specific, Fis family transcriptional regulator  36.67 
 
 
461 aa  65.1  0.0000000003  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2107  response regulator receiver protein  34.78 
 
 
768 aa  65.1  0.0000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_010084  Bmul_2164  two component, sigma54 specific, Fis family transcriptional regulator  36.67 
 
 
461 aa  64.7  0.0000000004  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.340092 
 
 
-
 
NC_009675  Anae109_1105  two component, sigma54 specific, Fis family transcriptional regulator  35.59 
 
 
475 aa  64.7  0.0000000004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.926771  normal  0.835973 
 
 
-
 
NC_008060  Bcen_0660  two component, sigma54 specific, Fis family transcriptional regulator  36.67 
 
 
461 aa  64.7  0.0000000004  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_1016  two component, sigma54 specific, Fis family transcriptional regulator  36.67 
 
 
461 aa  64.7  0.0000000004  Burkholderia ambifaria AMMD  Bacteria  normal  0.29025  n/a   
 
 
-
 
NC_014150  Bmur_0931  response regulator receiver protein  31.67 
 
 
430 aa  64.3  0.0000000005  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_0185  type IV fimbriae expression regulatory protein PilR, putative  33.33 
 
 
445 aa  64.3  0.0000000005  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.103259  n/a   
 
 
-
 
NC_007509  Bcep18194_C7223  response regulator receiver modulated metal dependent phosphohydrolase  36.67 
 
 
473 aa  64.3  0.0000000005  Burkholderia sp. 383  Bacteria  normal  0.58817  normal  0.218696 
 
 
-
 
NC_011206  Lferr_0364  two component, sigma54 specific, transcriptional regulator, Fis family  33.33 
 
 
451 aa  64.3  0.0000000005  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.48055 
 
 
-
 
NC_011145  AnaeK_2533  two component, sigma54 specific, transcriptional regulator, Fis family  35.77 
 
 
483 aa  63.9  0.0000000007  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2629  two component, sigma54 specific, transcriptional regulator, Fis family  35.77 
 
 
483 aa  63.9  0.0000000008  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.14604  n/a   
 
 
-
 
NC_007760  Adeh_1326  two component, sigma54 specific, Fis family transcriptional regulator  35.77 
 
 
485 aa  63.5  0.0000000008  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1300  PAS  38.79 
 
 
695 aa  63.5  0.0000000009  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.233563 
 
 
-
 
NC_012791  Vapar_0508  histidine kinase  37.5 
 
 
663 aa  63.5  0.0000000009  Variovorax paradoxus S110  Bacteria  normal  0.217821  n/a   
 
 
-
 
NC_007650  BTH_II0731  response regulator  33.86 
 
 
476 aa  63.2  0.000000001  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_4291  response regulator receiver protein  34.17 
 
 
271 aa  63.2  0.000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_0435  response regulator receiver protein  29.03 
 
 
124 aa  63.2  0.000000001  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00876892  n/a   
 
 
-
 
NC_004578  PSPTO_1490  sensory box histidine kinase/response regulator  37.93 
 
 
695 aa  62  0.000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.135352  n/a   
 
 
-
 
NC_010551  BamMC406_1020  two component, sigma54 specific, Fis family transcriptional regulator  35.83 
 
 
461 aa  62.4  0.000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1091  two component, sigma-54 specific, Fis family transcriptional regulator  35.83 
 
 
460 aa  62.8  0.000000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_1179  two component, sigma54 specific, Fis family transcriptional regulator  35.38 
 
 
457 aa  62.8  0.000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  0.655382  n/a   
 
 
-
 
NC_002947  PP_3757  response regulator receiver protein  33.61 
 
 
125 aa  61.6  0.000000003  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2442  two component, sigma54 specific, Fis family transcriptional regulator  34.96 
 
 
480 aa  61.6  0.000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2006  response regulator receiver protein  33.61 
 
 
125 aa  61.6  0.000000003  Pseudomonas putida F1  Bacteria  normal  normal  0.267349 
 
 
-
 
NC_010501  PputW619_2110  response regulator receiver protein  33.61 
 
 
125 aa  62  0.000000003  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_1220  response regulator receiver domain-containing protein  34.68 
 
 
143 aa  61.2  0.000000004  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000878383 
 
 
-
 
NC_008786  Veis_1498  two component, sigma54 specific, Fis family transcriptional regulator  31.82 
 
 
500 aa  61.2  0.000000004  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_0516  two component, sigma54 specific, Fis family transcriptional regulator  31.2 
 
 
468 aa  61.2  0.000000004  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000971097  n/a   
 
 
-
 
NC_008340  Mlg_0258  two component, sigma54 specific, Fis family transcriptional regulator  30.16 
 
 
451 aa  61.6  0.000000004  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.667822  normal 
 
 
-
 
NC_010725  Mpop_0098  PAS/PAC sensor hybrid histidine kinase  35.34 
 
 
1050 aa  61.6  0.000000004  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_2773  sigma-54 dependent DNA-binding response regulator  35.83 
 
 
465 aa  61.2  0.000000005  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0318  two component, sigma54 specific, transcriptional regulator, Fis family  32.85 
 
 
444 aa  60.8  0.000000005  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.623728  n/a   
 
 
-
 
NC_006348  BMA0549  sigma-54 dependent DNA-binding response regulator  35.83 
 
 
465 aa  61.2  0.000000005  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2887  sigma-54 interacting response regulator protein  35.83 
 
 
465 aa  61.2  0.000000005  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2821  sigma-54 dependent DNA-binding response regulator  35.83 
 
 
465 aa  61.2  0.000000005  Burkholderia mallei NCTC 10229  Bacteria  normal  0.428472  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2460  sigma-54 dependent DNA-binding response regulator  35.83 
 
 
465 aa  61.2  0.000000005  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1783  sigma-54 dependent DNA-binding response regulator  35.83 
 
 
465 aa  61.2  0.000000005  Burkholderia mallei NCTC 10247  Bacteria  normal  0.231821  n/a   
 
 
-
 
NC_009076  BURPS1106A_2834  sigma-54 dependent DNA-binding response regulator  35.83 
 
 
465 aa  61.2  0.000000005  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_012853  Rleg_5422  histidine kinase  32.79 
 
 
685 aa  60.8  0.000000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0504919 
 
 
-
 
NC_008782  Ajs_3630  two component, sigma54 specific, Fis family transcriptional regulator  34.45 
 
 
502 aa  60.8  0.000000006  Acidovorax sp. JS42  Bacteria  normal  0.670707  normal 
 
 
-
 
NC_007498  Pcar_1042  two component signal transduction response regulator  36.97 
 
 
465 aa  60.8  0.000000006  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.472622  n/a   
 
 
-
 
NC_011146  Gbem_2658  two component, sigma54 specific, transcriptional regulator, Fis family  37.65 
 
 
458 aa  60.8  0.000000006  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2940  two component, sigma54 specific, transcriptional regulator, Fis family  34.45 
 
 
502 aa  60.8  0.000000006  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  31.71 
 
 
461 aa  60.5  0.000000007  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_003910  CPS_1620  sensory box sensor histidine kinase/response regulator  33.64 
 
 
927 aa  60.5  0.000000008  Colwellia psychrerythraea 34H  Bacteria  normal  0.831264  n/a   
 
 
-
 
NC_013173  Dbac_1989  response regulator receiver protein  33.05 
 
 
128 aa  60.5  0.000000008  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1745  response regulator receiver sensor signal transduction histidine kinase  34.17 
 
 
417 aa  60.5  0.000000008  Geobacter lovleyi SZ  Bacteria  normal  0.0330192  n/a   
 
 
-
 
NC_012918  GM21_1577  two component, sigma54 specific, transcriptional regulator, Fis family  36.47 
 
 
458 aa  60.5  0.000000008  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  32.28 
 
 
144 aa  60.1  0.000000009  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_007498  Pcar_2365  two component signal transduction response regulator  31.97 
 
 
575 aa  60.1  0.000000009  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_0150  two component, sigma54 specific, Fis family transcriptional regulator  33.93 
 
 
448 aa  60.1  0.000000009  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0133  two component, sigma54 specific, transcriptional regulator, Fis family  33.93 
 
 
448 aa  60.1  0.00000001  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_1939  sensory box sensor histidine kinase/response regulator  31.9 
 
 
1328 aa  59.3  0.00000001  Colwellia psychrerythraea 34H  Bacteria  normal  0.282055  n/a   
 
 
-
 
NC_004578  PSPTO_0334  alginate biosynthesis transcriptional regulatory protein AlgB  33.63 
 
 
448 aa  59.7  0.00000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.368066  n/a   
 
 
-
 
NC_007005  Psyr_0263  helix-turn-helix, Fis-type  33.63 
 
 
448 aa  59.7  0.00000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2146  response regulator receiver protein  32.79 
 
 
125 aa  59.7  0.00000001  Pseudomonas putida GB-1  Bacteria  normal  0.41399  hitchhiker  0.000968824 
 
 
-
 
NC_012791  Vapar_0958  two component, sigma54 specific, transcriptional regulator, Fis family  36.11 
 
 
513 aa  59.7  0.00000001  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2825  Fis family transcriptional regulator  36.13 
 
 
589 aa  59.7  0.00000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.208492  n/a   
 
 
-
 
NC_013223  Dret_2242  two component, sigma54 specific, transcriptional regulator, Fis family  31.15 
 
 
464 aa  59.7  0.00000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.719582 
 
 
-
 
NC_009523  RoseRS_0338  response regulator receiver modulated metal dependent phosphohydrolase  31.54 
 
 
513 aa  59.7  0.00000001  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.102838 
 
 
-
 
NC_008554  Sfum_2092  two component, sigma54 specific, Fis family transcriptional regulator  30.16 
 
 
462 aa  60.1  0.00000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.131918 
 
 
-
 
NC_008751  Dvul_2827  response regulator receiver protein  27.27 
 
 
137 aa  59.7  0.00000001  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_2335  histidine kinase  31.9 
 
 
610 aa  58.9  0.00000002  Ralstonia pickettii 12D  Bacteria  normal  0.249479  normal  0.165398 
 
 
-
 
NC_009656  PSPA7_6282  two-component response regulator AlgB  32.74 
 
 
449 aa  58.9  0.00000002  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1716  response regulator  33.62 
 
 
475 aa  58.9  0.00000002  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1923  response regulator  33.62 
 
 
475 aa  58.9  0.00000002  Burkholderia mallei NCTC 10229  Bacteria  normal  0.537818  n/a   
 
 
-
 
NC_010322  PputGB1_0148  two component, sigma54 specific, Fis family transcriptional regulator  33.04 
 
 
448 aa  58.9  0.00000002  Pseudomonas putida GB-1  Bacteria  normal  normal  0.837927 
 
 
-
 
NC_006349  BMAA1662  response regulator  33.62 
 
 
475 aa  58.9  0.00000002  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_011366  Rleg2_5991  PAS/PAC sensor hybrid histidine kinase  33.64 
 
 
642 aa  59.3  0.00000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A2231  response regulator  33.62 
 
 
475 aa  58.9  0.00000002  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0257  response regulator receiver  32.54 
 
 
241 aa  58.9  0.00000002  Thermobifida fusca YX  Bacteria  normal  0.926332  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0711  response regulator  33.62 
 
 
518 aa  59.3  0.00000002  Burkholderia pseudomallei 1710b  Bacteria  normal  0.226782  n/a   
 
 
-
 
NC_007492  Pfl01_0046  two-component response regulator AlgB  34.51 
 
 
448 aa  58.9  0.00000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.384971 
 
 
-
 
NC_009523  RoseRS_0520  multi-sensor signal transduction histidine kinase  32.52 
 
 
556 aa  59.3  0.00000002  Roseiflexus sp. RS-1  Bacteria  normal  0.936608  normal  0.731504 
 
 
-
 
NC_010622  Bphy_0847  two component, sigma54 specific, Fis family transcriptional regulator  34.17 
 
 
460 aa  59.3  0.00000002  Burkholderia phymatum STM815  Bacteria  normal  0.0166749  normal 
 
 
-
 
NC_011891  A2cp1_1183  two component, sigma54 specific, transcriptional regulator, Fis family  33.9 
 
 
481 aa  58.9  0.00000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0198  two component, sigma54 specific, transcriptional regulator, Fis family  32.41 
 
 
461 aa  58.9  0.00000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0599  response regulator  33.62 
 
 
475 aa  58.9  0.00000002  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5187  two-component response regulator PilR  29.13 
 
 
445 aa  58.9  0.00000002  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0852  GAF sensor hybrid histidine kinase  32.76 
 
 
1055 aa  58.9  0.00000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_7140  PAS/PAC sensor hybrid histidine kinase  35.45 
 
 
642 aa  59.3  0.00000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.750197  normal 
 
 
-
 
NC_010682  Rpic_2724  integral membrane sensor hybrid histidine kinase  31.9 
 
 
631 aa  58.9  0.00000002  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1360  two component, sigma54 specific, transcriptional regulator, Fis family  32.26 
 
 
525 aa  59.3  0.00000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008463  PA14_60260  two-component response regulator PilR  30.23 
 
 
445 aa  58.9  0.00000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.000000831057 
 
 
-
 
NC_008463  PA14_72380  two-component response regulator AlgB  32.74 
 
 
449 aa  58.9  0.00000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.415261  normal 
 
 
-
 
NC_008554  Sfum_0643  two component, sigma54 specific, Fis family transcriptional regulator  30.63 
 
 
478 aa  59.3  0.00000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0097  two component, sigma54 specific, transcriptional regulator, Fis family  29.27 
 
 
448 aa  59.3  0.00000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0866  two component, sigma54 specific, Fis family transcriptional regulator  33.61 
 
 
496 aa  58.9  0.00000002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.555974  normal  0.133337 
 
 
-
 
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