| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1016 |
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| Symbol | |
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| ID | 4310951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1104324 |
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| End bp | 1105709 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638148820 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_772909 |
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| Protein GI | 115351070 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.29025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACACG CCCTGATTGT CGAAGACGAT CCCAACAGTC TGTCCGGCCT GACCGCGCTG
CTTGCCGCAG ACGGCTTCTC GGTCGACACG GCCACGTCGC TCGCCGAGGC ACGCACGGCG
CTCGGCCGCT CGATTCCCGA TGTCGTCCTC GTCGACCTGA ACCTGCCGGA CGGCAGCGGG
TTCGACCTGC TCCAGCATCT GCCGCAGCAG CAGCCGAACG GGTCGCTGCC GGTGATCGTG
CTGACGGGCA ACGCGACGGT GGAGAGCGCG ATCGAGGGCC TGCGTCACGG CATCTGGGAC
TACCTGCTCA AGCCGATCAA CATTCCGCGC CTGCGCAGCC TGCTGGCCCG GATTCCGCGG
CCCTACGAAT TGATCGACGA AGTGCGGACG CTGCGTGCGT CGCTGCGCCA CCTCGGCCGC
TTCGGCGCGC TCGTCGGCCG CAGCGAGGCG ATGCAGCACG TGTACGACAT GATCGAGCAC
AACGCGGGCA CCGAAACGGC CGTGCTGTTC GCGGGCGAGG CCGGCACCGG CAAGAAGCTG
GCCGCCCGCA CGCTGCACGA CCTGAGCCGG CGCCGCAAGG GGCCGTTCGT GTCGTTCGAC
TGCCGCACGA TCGCGCAAGC CGGCCGTCAC GGCGCGTCGC TCGACAGCAT CCTGTTCGGC
CATGAGCGCG GCGCGTTCGA CGGCGCCGAG CGGCGCGAAT CGGGCCTGTT CGAACAGGCC
GGCGGCGGCA CGCTGTGCCT CGACGAGATC ACCGCACTGC CGCTCGTGCT GCAGGAGGCG
CTGCTGCATG CGCTCGACTC GCAGAACTTC ATGCGGATCG GCGGCACGAG CTCGATCGCG
AGCGACTTCC GGCTGATCGC CACCACGCGC CGCCCGGCCC GCGACGCGGT CGCGAACGGC
CTGCTGCGCG AGGATCTGTG GCTGCGTCTC GATGCGGCAT CGATCACGAT GCCGCCGCTG
CGCGAGCGCG ACGGCGATGC GCTCGCCATC GCCGATTCCC TGATCGACGA ACTGAACCGC
GACGCGCGCG CCACCGGCCG CGGCACGACC GACAAGCGCG CGGCGCAGGG CTTCGTGCGC
GAATGCCTGT CCTACGAATG GCCGGGCAAC GTGCGCGAAC TGCACGAGCG CGTGCGCTTT
GCCTATGATG CGTCCGGCGA CTTCATCGAG ACGCTGCGCG CGGGCGAAGC GAGCTTCGCG
GCCGGCGCCG CACTGAACGG CAGCAGCGTG CAGATCAAGG TCGGCACCCC GCTGTCCGAC
GTAGAGGATC TGCTGATCCG CGCGACGCTC GACGCGGTCG GCGGCACGCG CCATCGCGCG
GCCACGCTGC TCGGCATCAG CCCCAAGACG CTGTACAACA AGCTGCAGCG AATGAAGGTC
AACTGA
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| Protein sequence | MPHALIVEDD PNSLSGLTAL LAADGFSVDT ATSLAEARTA LGRSIPDVVL VDLNLPDGSG
FDLLQHLPQQ QPNGSLPVIV LTGNATVESA IEGLRHGIWD YLLKPINIPR LRSLLARIPR
PYELIDEVRT LRASLRHLGR FGALVGRSEA MQHVYDMIEH NAGTETAVLF AGEAGTGKKL
AARTLHDLSR RRKGPFVSFD CRTIAQAGRH GASLDSILFG HERGAFDGAE RRESGLFEQA
GGGTLCLDEI TALPLVLQEA LLHALDSQNF MRIGGTSSIA SDFRLIATTR RPARDAVANG
LLREDLWLRL DAASITMPPL RERDGDALAI ADSLIDELNR DARATGRGTT DKRAAQGFVR
ECLSYEWPGN VRELHERVRF AYDASGDFIE TLRAGEASFA AGAALNGSSV QIKVGTPLSD
VEDLLIRATL DAVGGTRHRA ATLLGISPKT LYNKLQRMKV N
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