Gene Psyr_0263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0263 
Symbol 
ID3365739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp278848 
End bp280194 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content61% 
IMG OID637650606 
Producthelix-turn-helix, Fis-type 
Protein accessionYP_233374 
Protein GI66043533 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAG CCACTGAGAA TCAGGGCCGT ATTCTGCTTG TGGACGACGA GTCCGCCATC 
CTCCGCACTT TCCGGTACTG TCTGGAAGAC GAAGGCTACA GTGTCGCCAC TGCCAACAGC
GCAGCCCAGG CCGACACGCT CATGCAGCGT CAAGTATTCG ATCTGTGCTT TCTCGATTTG
CGTCTGGGCG AAGACAACGG CCTGGACGTG CTGGCGCAGA TGCGGATTCA GGCGCCGTGG
ATGCGTGTGG TGATCGTGAC TGCCCATTCG GCGGTGGACA CGGCTGTGGA TGCCATTCAG
GCTGGCGCAG CCGATTATCT GGTCAAGCCG TGCAGTCCTG ACCAGTTGCG TCTTGCGACG
GCCAAGCAGC TTGAAGTCAG GCAACTGTCT GCACGTCTTG AAGCACTGGA AGGCGAGGTT
CGCAAGCCCA AGGATGGTCT GGATTCCCAC AGCCCTTCGA TGATGGCCAT TCTGGAAACG
GCTCGTCAGG TTGCTGTAAC CGATGCCAAC ATCCTGATTC TGGGTGAGTC GGGTACCGGT
AAGGGCGAGC TGGCCAGGGC GATTCATGGC TGGAGCAAGC GGGCCAAGAA GTCCTGCGTC
ACGATCAACT GCCCGTCGCT GACCGCAGAA CTGATGGAAA GCGAGCTGTT CGGCCACAGC
CGCGGTGCCT TTACCGGTGC CAGTGAAAGC ACGCTGGGTC GCGTCAATCA GGCCGATGGC
GGCACCCTGT TCCTCGACGA AATCGGTGAC TTCCCGCTGA CGCTGCAGCC CAAGCTGCTG
CGCTTCATTC AGGACAAGGA ATACGAGCGC GTCGGCGACC CGGTGACTCG ACGTGCCGAC
GTGCGCATCC TGGCCGCCAC CAACCTCAAC CTTGAGGACA TGGTGCGCAG CGGACGTTTC
CGTGAGGATC TGCTGTACCG CCTGAACGTG ATCACCCTGA ATCTGCCCGC CCTGCGTGAG
CGCAGCGAAG ACATTCTGAC CCTGGCGGAT CGCTTTCTGG CGCGCTTCGT CAAGGAGTAC
GCTCGTCCGG CTCGCGGCTT CAGCGAGGAG GCCCGCGCGG CGCTGCTCAA TTACCGCTGG
CCGGGCAACA TTCGTGAGCT GCGCAACGTG ATCGAGCGTG CCAGCATCAT CTGTCCACAG
GAACGCGTAG AGGTCAGTCA TCTGGGCATG GCTGAGCAAC CGACCAACAA CGCACCGCGG
GTGGGGGCAG CCTTGAGTCT GGACGAGCTT GAAAAGGCAC ACATCGGGGC CGTACTGGCA
ACCAGTGAAA CCCTTGATCA GGCCGCCAAG ACCCTGGGTA TCGATGCTTC GACGCTTTAC
CGCAAACGAA AACAGTACAA CCTATGA
 
Protein sequence
MEAATENQGR ILLVDDESAI LRTFRYCLED EGYSVATANS AAQADTLMQR QVFDLCFLDL 
RLGEDNGLDV LAQMRIQAPW MRVVIVTAHS AVDTAVDAIQ AGAADYLVKP CSPDQLRLAT
AKQLEVRQLS ARLEALEGEV RKPKDGLDSH SPSMMAILET ARQVAVTDAN ILILGESGTG
KGELARAIHG WSKRAKKSCV TINCPSLTAE LMESELFGHS RGAFTGASES TLGRVNQADG
GTLFLDEIGD FPLTLQPKLL RFIQDKEYER VGDPVTRRAD VRILAATNLN LEDMVRSGRF
REDLLYRLNV ITLNLPALRE RSEDILTLAD RFLARFVKEY ARPARGFSEE ARAALLNYRW
PGNIRELRNV IERASIICPQ ERVEVSHLGM AEQPTNNAPR VGAALSLDEL EKAHIGAVLA
TSETLDQAAK TLGIDASTLY RKRKQYNL