Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0263 |
Symbol | |
ID | 3365739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 278848 |
End bp | 280194 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637650606 |
Product | helix-turn-helix, Fis-type |
Protein accession | YP_233374 |
Protein GI | 66043533 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCAG CCACTGAGAA TCAGGGCCGT ATTCTGCTTG TGGACGACGA GTCCGCCATC CTCCGCACTT TCCGGTACTG TCTGGAAGAC GAAGGCTACA GTGTCGCCAC TGCCAACAGC GCAGCCCAGG CCGACACGCT CATGCAGCGT CAAGTATTCG ATCTGTGCTT TCTCGATTTG CGTCTGGGCG AAGACAACGG CCTGGACGTG CTGGCGCAGA TGCGGATTCA GGCGCCGTGG ATGCGTGTGG TGATCGTGAC TGCCCATTCG GCGGTGGACA CGGCTGTGGA TGCCATTCAG GCTGGCGCAG CCGATTATCT GGTCAAGCCG TGCAGTCCTG ACCAGTTGCG TCTTGCGACG GCCAAGCAGC TTGAAGTCAG GCAACTGTCT GCACGTCTTG AAGCACTGGA AGGCGAGGTT CGCAAGCCCA AGGATGGTCT GGATTCCCAC AGCCCTTCGA TGATGGCCAT TCTGGAAACG GCTCGTCAGG TTGCTGTAAC CGATGCCAAC ATCCTGATTC TGGGTGAGTC GGGTACCGGT AAGGGCGAGC TGGCCAGGGC GATTCATGGC TGGAGCAAGC GGGCCAAGAA GTCCTGCGTC ACGATCAACT GCCCGTCGCT GACCGCAGAA CTGATGGAAA GCGAGCTGTT CGGCCACAGC CGCGGTGCCT TTACCGGTGC CAGTGAAAGC ACGCTGGGTC GCGTCAATCA GGCCGATGGC GGCACCCTGT TCCTCGACGA AATCGGTGAC TTCCCGCTGA CGCTGCAGCC CAAGCTGCTG CGCTTCATTC AGGACAAGGA ATACGAGCGC GTCGGCGACC CGGTGACTCG ACGTGCCGAC GTGCGCATCC TGGCCGCCAC CAACCTCAAC CTTGAGGACA TGGTGCGCAG CGGACGTTTC CGTGAGGATC TGCTGTACCG CCTGAACGTG ATCACCCTGA ATCTGCCCGC CCTGCGTGAG CGCAGCGAAG ACATTCTGAC CCTGGCGGAT CGCTTTCTGG CGCGCTTCGT CAAGGAGTAC GCTCGTCCGG CTCGCGGCTT CAGCGAGGAG GCCCGCGCGG CGCTGCTCAA TTACCGCTGG CCGGGCAACA TTCGTGAGCT GCGCAACGTG ATCGAGCGTG CCAGCATCAT CTGTCCACAG GAACGCGTAG AGGTCAGTCA TCTGGGCATG GCTGAGCAAC CGACCAACAA CGCACCGCGG GTGGGGGCAG CCTTGAGTCT GGACGAGCTT GAAAAGGCAC ACATCGGGGC CGTACTGGCA ACCAGTGAAA CCCTTGATCA GGCCGCCAAG ACCCTGGGTA TCGATGCTTC GACGCTTTAC CGCAAACGAA AACAGTACAA CCTATGA
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Protein sequence | MEAATENQGR ILLVDDESAI LRTFRYCLED EGYSVATANS AAQADTLMQR QVFDLCFLDL RLGEDNGLDV LAQMRIQAPW MRVVIVTAHS AVDTAVDAIQ AGAADYLVKP CSPDQLRLAT AKQLEVRQLS ARLEALEGEV RKPKDGLDSH SPSMMAILET ARQVAVTDAN ILILGESGTG KGELARAIHG WSKRAKKSCV TINCPSLTAE LMESELFGHS RGAFTGASES TLGRVNQADG GTLFLDEIGD FPLTLQPKLL RFIQDKEYER VGDPVTRRAD VRILAATNLN LEDMVRSGRF REDLLYRLNV ITLNLPALRE RSEDILTLAD RFLARFVKEY ARPARGFSEE ARAALLNYRW PGNIRELRNV IERASIICPQ ERVEVSHLGM AEQPTNNAPR VGAALSLDEL EKAHIGAVLA TSETLDQAAK TLGIDASTLY RKRKQYNL
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