| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1300 |
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| Symbol | |
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| ID | 3366795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1468991 |
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| End bp | 1471078 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637651639 |
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| Product | PAS |
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| Protein accession | YP_234389 |
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| Protein GI | 66044548 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.233563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATATCGC CCACTGGTTT CCCGACCGCC AACGGCAAGG CCGCCGGGAT TATCCGATCC
AGGGACTGGA GCCAGACTTC ACTCGGACCG ATCGAGCACT GGCCGGTATC GCTGAAAAAC
ACCCTGAATC TGATCCTCAA TTCCCCGGAG TCCATGTACC TGCTCTGGGG GCCGGATCTG
GTGTTTTTCC ACAATGACGC CTATACGCCG ATTCTCGGCC CGCGCAAGGA CAACGCTATC
GGCGCACTCA TTCCGGATCT GTGGGCTGAC GTCTGGGATC AGGTCGCGCC GCTGGTGATC
GATGCGTTTG CCGGCAAGCC CTGCCGCTAC ACGGATATGC CGCTGACCAT GGCACGCTAC
GGCGAGGTCG AACAGACATG GTGGTCATTT TCGTTTTCAC CGGTAATCGA CGAATACGGC
GTGGTTGTCG GCATGTTCTG CATCACCAAC GAAACCACCG CGCATGTCCT CAACCAGCAG
GCGCTGCAGG ATAGCGAACG CAAACGCCTG AAACTGATCG ATGATCTGGT CAGCCTGGAA
CGACAGCAGA CCGCCAGGCT GGAGCAACGC ACGCTGGAGC TGGACACGTT TTGGGAGATA
TCTCCGGACC CGCTGGCGAT ACTCGATTTC AACGGTATCT TTCTGCGGGT AAACCCGGCC
TGGACAGCGC TGCTGGGCCA CCCGGAACAC GAGCTGCTGG GCACCTCCAT CATGACCCTG
CTGCATCCGG ATGATGTCAG CGGCACCCAG AATGCTCTGA AACACACCAT CAACCATGTG
CTGCCGCTGT TTGAAAATCG TTATCAGCAC GTCGACGGCA GCTATCACTG GTTCGGCTGG
ACCGCGGCAC CCGGCAATGG AATCATTTTT GCGCTGGGCA AACACCTGAC CCACGAAAAG
GACCGCATCA AGGCACTGCG TATCGCCGAA GAGGCCTTGA TTCAATCGCA GAAAATGGAA
GCGGTCGGGC AATTGACCGG CGGTCTGGCT CATGACTTCA ACAACCTGCT GATGGGCGTG
ACCGGCAACA TGGAGCTGCT CCTGTCGAGG ATCAGACAGG AACGCTTCAC AGAGCTGGAC
CGCTACATCA ACGCCGCACT GGAAGGTTCG CGACGCGCGG CATCCCTGAC ACATCGACTG
CTGGCATTTT CGCGCCGTCA GACACTGGCG CCCAAGGCTA CTGATATCGA CCTGCTGGTC
GTGGACATGG ACGAGCTGAT CCGGCGCACC GTAGGTCCGG CCATCGATAT GCAGGTCAAT
GCCTCACGCG GACTGTGGGC GACCCTGGTT GACCCGCATC AACTGGAAAA TTCACTGCTC
AACCTGTGCA TCAACGCCAA GGACGCCATG CCCGATGGCG GAAAGCTGCT GATCCAGACG
GGCAACCGTC ACCTGACTGC AGTCACGGCG ACCCGGTATC AGTTGCCTGC AGGCCGCTAT
GTGGAACTGT CCGTCAGCGA CTCCGGCACG GGCATGAGCA ACGACGTCAT GGCGAGGGCC
TTCGACCCGT TCTTCACCAC CAAACCGACA GGCATGGGCA CCGGACTGGG GTTGTCGATG
ATTTACGGTT TTGCACGGCA GTCAGGTGGC GGCGTCTACA TCACGTCAAA GGTTGGCGAG
GGTTCGAAAG TCAGCATTCT GCTGCCGATG CACGAAGGCG AAGCTGAAAC AGTGGCCTTC
GATGACAGCC CGCTGCAAGT GCCCGCCTCC AGCACCGGCG ACGAAACCAT TCTGGTGGTC
GATGACGAGC CCGCCGTGCG CTTGCTCATT ACGGAGTTGC TAGAGGACCT TGGCTATATC
GTTTTGCAGG CTGAACGAGG CGCCGATGCG CTGACCATTC TGCAGTCCAA GGCGGCCATC
GACCTGCTGA TCACCGACGT CGGTCTGCCG GGCGGCATGA ACGGTCGTCA GGTCGCAGAC
GCGGCGCGGG ATGTCCGGCC CGACCTGAAA ATCCTGTTTG TGACCGGTTA TGCTGAAAAC
GCCGCGTTGG CGCATGACAC GCTGGAGCCG GGCATGCACG TGCTGCCCAA GCCCTTTGCG
ATTGCCGAAC TGATCGGCCG CGTCACCGAG CTGCTGGAAG GCGAGTAA
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| Protein sequence | MISPTGFPTA NGKAAGIIRS RDWSQTSLGP IEHWPVSLKN TLNLILNSPE SMYLLWGPDL
VFFHNDAYTP ILGPRKDNAI GALIPDLWAD VWDQVAPLVI DAFAGKPCRY TDMPLTMARY
GEVEQTWWSF SFSPVIDEYG VVVGMFCITN ETTAHVLNQQ ALQDSERKRL KLIDDLVSLE
RQQTARLEQR TLELDTFWEI SPDPLAILDF NGIFLRVNPA WTALLGHPEH ELLGTSIMTL
LHPDDVSGTQ NALKHTINHV LPLFENRYQH VDGSYHWFGW TAAPGNGIIF ALGKHLTHEK
DRIKALRIAE EALIQSQKME AVGQLTGGLA HDFNNLLMGV TGNMELLLSR IRQERFTELD
RYINAALEGS RRAASLTHRL LAFSRRQTLA PKATDIDLLV VDMDELIRRT VGPAIDMQVN
ASRGLWATLV DPHQLENSLL NLCINAKDAM PDGGKLLIQT GNRHLTAVTA TRYQLPAGRY
VELSVSDSGT GMSNDVMARA FDPFFTTKPT GMGTGLGLSM IYGFARQSGG GVYITSKVGE
GSKVSILLPM HEGEAETVAF DDSPLQVPAS STGDETILVV DDEPAVRLLI TELLEDLGYI
VLQAERGADA LTILQSKAAI DLLITDVGLP GGMNGRQVAD AARDVRPDLK ILFVTGYAEN
AALAHDTLEP GMHVLPKPFA IAELIGRVTE LLEGE
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