| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1620 |
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| Symbol | |
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| ID | 3519752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1668522 |
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| End bp | 1671305 |
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| Gene Length | 2784 bp |
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| Protein Length | 927 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637284083 |
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| Product | sensory box sensor histidine kinase/response regulator |
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| Protein accession | YP_268358 |
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| Protein GI | 71279298 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.831264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAT CACCTGAAAA TGACAGCTTA GTCTCGGCTG TATTTGACTC TAGCCCTATA
GGTATACAAA TCATTGATTT AGAAACGGGT ATGCGGGAAA AAATCAATCA AACAGCCTGT
GTTCTGCTAG GTGATACTAA AGATAATTTA ATGGCTAAAA GTGTATTTGA AGATTGCACA
TGGCTTGGTA AAGATAAATT CTTATTTGTC ATTGAGCGTT TAAAAGAGAA CAAAACACTA
AAAAATCATA TTGTCCAGTT CGAAAATCAT CAGGGTAATG AATTAACGAT TAGCTATGAT
ATATCTGAAT TTAAATATAG ATCTAAAAGA CTCGTTACCG TTTCAATGAA CGATGTAACC
GAACAGCATT ATTTACTCAA GAATATATCA GATACCGCTA ACTTGATATT TTCTGATGAT
GACACTAGTT TCTTTGATAA TGTCACGCTA AAAATTGCTG AATTATTTGA AGCAGCGCAT
GTTTTTATTG GATTGAATAA TTTTGATGAT GGCTTGAAAA TGAAAACAGT GTCCTATTGT
TGCTACAACC AAATAATTGA AAATTTCACC TATAACCTTA AACATACCCC ATGTGCAAAT
ATTGTAAAAG ATATAAATGG TAATGCTTGT TATGTCTATC AAGATGTTCA AACGTTATTC
CCAAAAGATT CATTCTTTAT AGAAAAAAAG ATTAAAAGTT ATATCGGAAT GCCAATTTTC
GACATTAATA AGAAAACTAT TGGCGGATTG ATTTTATTGT TCACCAAAGA TATTAATAAG
AATACATATT GGGAGGATCT TTTAAAGATT TTTTCCGGAA AAATCTCTAG TGAATTAAAA
CACCTAACTC TTCATAACAC CCATTATGAA GCGCAACAAC ATTTAAAATT ATATAGTGAA
CAAGCACCCC TAGCGTTATT TAAATGGGAT TTGGGGTTTA ATTTACTTGA GTGTAATCAA
TCAGCAATCA GCATGCTAAA TTATACCGAA GATGAGCTAA AACAGTGTGA CTTTATCTCA
GCCTTAGTGC CTATTAATGA ACAAAAAAGA GTTAACAAGA CATGTTCTGA TTTACTGGTT
AACGAAGGAG GCGAACATGG CTTTAATTCG TTAATTAAAC AAAATGGGAA TATTATTTTA
ACTGAATGGC ATAACTCACT CATTAAAGAT GATTCTGGAG CTGCTATAGG TGTTATTTCC
ATTGTTAAAG ACATCACTCA AGAGCGACAG CAACTAAAAC GTTTAGCTCA AAAAGAAACA
GAAAAACGAG AGATTATAAA CGCAATAATT GACGCTGTTA TTACCATCAA TAGTAAAGGA
ATTATTTTAA GTGTAAATGC CGCGACTGAA AAAATGTTTG GTTATTCGGT TGATGAACTA
TTGGGGGAAA ATATTAAGTT ATTAATGCCA AAATCAACAG CCGTTAAACA TGACACTTAT
CTAGAAAATT ATCTCCAAAC GAAAGAAGCA CAAATTATAG GTATTGGCCG TAAAGTGATA
GCTATTAAAA AAAATGGGCA AGAATTTCCT ATTTACTTAG GCATTGCTGA ACTATCCCCA
GATGAAAATA ATAATATTCG TTATGTTGGC ACTTGCCATG ATCTAAGCCT ATTTACTGAA
CAGCAAAACA AGTTGCAGCG TATACAAAAA ATGGATGCGT TAGGAAAGTT AACCGGAGGC
ATTGCTCATG ATTTTAATAA TCTATTGGGC ATTGTGTCGG GTTTTGGCGA ACTATTAGAA
CTAAAATTAG GACAAGACCC AAAGCTATCT AAATATTGTA GGCAAATTAT TACTGCGAGT
GAGCGTGGTA GTGAGTTAAC CCGTAAATTG TTGGATTTTT CAAAACAAGA AAGTAAGAAA
AGTACAGTGT GTAATATTAA TGATTTATTA ACGGCTACTC AAGGAATGAT AGCAAAAACA
CTTACAGTAT TAGTAACCGT AAATTACACA TTAGCAGACG ATTTATGGTG CAGTACAATC
GACATAAGTG CGTTTGATGA TGTGATTCTA AATTTATGTA TTAATGCCAA ACATGCCATG
TCAAATGGCG GATTATTATC AATATCAACT CAAAACGTAA CACTTTCAGC TATTGAAGCT
GAACGATATA ATTTAACCGC GGGAGATTTT GTTTCTTTAA CCATCACGGA TAACGGATGT
GGAATGAACG ATAAAGTTAA ACGCCAGATA TTTGAACCTT TTTACACGAC TAAGGGCGAT
GAAGGTACTG GTCTAGGTTT ATCACAAGTT TATGGTTTTA TTACTTCTTC TCAGGGAAGC
ATTTACGTTT ATTCAGAAAC CAACATGGGT ACCTCAATTA ACATTTACTT ACCAAGAAGC
AAACCTAAAG AGAGTAAAAA TGTACTGAGT AAAAATGTAC TGAGTAAAAG TAAGTATATC
TCTTTAAAAG GGAAAGAAAA TATTTTAGTG GTTGATGACG AATTCTCCTT AGGACTATTA
GCAAAAACTA TTCTTGAAAA TGAAGGCTAT ACCGTTTTTC AAACAAGTTC TGGTGAAGAT
GCACTATTTT GCCTAACAGC ACACAATATC GACTTGATTA TTAGTGATGT AATTATGCCA
AAAACAACTG GTTATCAACT CATTGAAAAA GTTAGGGCTT TGGATATTAA CATTCCCATC
ATACTTGCTA CTGGCTTTGA TGGTTATATT AATATTTCCA AAGGCAATTA TTCAGATATT
CCCATTATCT CAAAACCATA CACTTCATAT GAATTATTAA CACAGACTCG AATGTCATTA
GATTCAAAAA AGATTGAAAA TTAA
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| Protein sequence | MFKSPENDSL VSAVFDSSPI GIQIIDLETG MREKINQTAC VLLGDTKDNL MAKSVFEDCT
WLGKDKFLFV IERLKENKTL KNHIVQFENH QGNELTISYD ISEFKYRSKR LVTVSMNDVT
EQHYLLKNIS DTANLIFSDD DTSFFDNVTL KIAELFEAAH VFIGLNNFDD GLKMKTVSYC
CYNQIIENFT YNLKHTPCAN IVKDINGNAC YVYQDVQTLF PKDSFFIEKK IKSYIGMPIF
DINKKTIGGL ILLFTKDINK NTYWEDLLKI FSGKISSELK HLTLHNTHYE AQQHLKLYSE
QAPLALFKWD LGFNLLECNQ SAISMLNYTE DELKQCDFIS ALVPINEQKR VNKTCSDLLV
NEGGEHGFNS LIKQNGNIIL TEWHNSLIKD DSGAAIGVIS IVKDITQERQ QLKRLAQKET
EKREIINAII DAVITINSKG IILSVNAATE KMFGYSVDEL LGENIKLLMP KSTAVKHDTY
LENYLQTKEA QIIGIGRKVI AIKKNGQEFP IYLGIAELSP DENNNIRYVG TCHDLSLFTE
QQNKLQRIQK MDALGKLTGG IAHDFNNLLG IVSGFGELLE LKLGQDPKLS KYCRQIITAS
ERGSELTRKL LDFSKQESKK STVCNINDLL TATQGMIAKT LTVLVTVNYT LADDLWCSTI
DISAFDDVIL NLCINAKHAM SNGGLLSIST QNVTLSAIEA ERYNLTAGDF VSLTITDNGC
GMNDKVKRQI FEPFYTTKGD EGTGLGLSQV YGFITSSQGS IYVYSETNMG TSINIYLPRS
KPKESKNVLS KNVLSKSKYI SLKGKENILV VDDEFSLGLL AKTILENEGY TVFQTSSGED
ALFCLTAHNI DLIISDVIMP KTTGYQLIEK VRALDINIPI ILATGFDGYI NISKGNYSDI
PIISKPYTSY ELLTQTRMSL DSKKIEN
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