Gene Pput_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2006 
Symbol 
ID5193630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2268889 
End bp2269266 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content59% 
IMG OID640586464 
Productresponse regulator receiver protein 
Protein accessionYP_001267330 
Protein GI148547228 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.267349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAG ATGCACAAGA TGTGGTTCTG GTCGTCGAGG ATGAACCGGC GATTCGCATG 
ATTTTGCGCG ATTACCTGGC GGGTGAGGGG TACCACGTCC TGGTGGCTGA GGATGGCGAG
CAGGCGTTTG CCATCCTGGC CAGCAAACCG CACCTGGACC TGATGGTGAC AGACTTCCGT
TTGCCGGGGG GGATCTCGGG GGTGGATATT GCCGAGCCCG CGGTGAAATT GCGGCCTGAC
CTGAAGGTGA TTTTCATCAG CGGCTACCCG GCGGAGATTC TCGAATCTGG CAGCCCGATC
ACCCGCAAGG CACCTATCCT GGCCAAGCCG TTTGACCTGG ATACCTTGCA CGAGCAGATC
CAGTCGCTGT TGCGCTGA
 
Protein sequence
MSEDAQDVVL VVEDEPAIRM ILRDYLAGEG YHVLVAEDGE QAFAILASKP HLDLMVTDFR 
LPGGISGVDI AEPAVKLRPD LKVIFISGYP AEILESGSPI TRKAPILAKP FDLDTLHEQI
QSLLR