| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0148 |
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| Symbol | |
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| ID | 5867836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 152730 |
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| End bp | 154076 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641545221 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001666400 |
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| Protein GI | 167031169 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.837927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCAG CCCAGGACAA CCAAGGCCGC ATTCTGCTGG TGGATGACGA GTCCGCGATC
CTGCGCACCT TCCGCTACTG CCTGGAGGAC GAGGGCTACA GCGTGGCCAC GGCCAACAGC
GCGGCCCAGG CCGAAAGCCT GCTGCAGCGC CAGGTGTTCG ACCTGTGCTT CCTCGATTTG
CGCCTGGGTG AAGACAATGG CCTGGACGTG CTGGCGCAGA TGCGTATCCA GGCCCCGTGG
ATGCGAGTGG TGATCGTTAC CGCACACTCG GCGATCGATA CAGCGGTAGA CGCCATCCAG
GCCGGCGCGG CCGACTACCT GGTCAAGCCG TGCAGCCCCG ACCAGTTGCG CCTGGCCACC
GCCAAGCAAC TGGAAGTGCG CCAGCTTTCT GCCCGCCTGG AGGCGTTGGA AGGTGAAATT
CGCAAACCCA AGGACGGCCT CGACTCTCAC AGCCCGGCCA TGATGGCGGT GCTGGAAACC
GCCCGCCAGG TCGCCACCAC CGACGCCAAC ATCCTCATCC TTGGCGAGTC CGGTACCGGC
AAGGGCGAGC TGGCACGGGC CATCCATGGC TGGAGCAAGC GCGCGCGCAA AGCCTGCGTG
ACCATCAACT GCCCGTCGCT CAACGCCGAG CTGATGGAAA GCGAGCTGTT CGGCCATACC
CGTGGCGCCT TCACCGGAGC CAGCGAAAGC ACCCTTGGGC GGGTCAGCCA AGCGGACGGC
GGCACGCTGT TCCTCGACGA AATCGGCGAT TTCCCGTTGA CCTTGCAGCC CAAACTGCTG
CGCTTCATCC AGGACAAGGA ATACGAACGC GTCGGCGACC CGGTTACCCG ACGTGCCGAT
GTGCGCATTC TGGCCGCCAC CAACCTCAAC CTCGAAGAGA TGGTGCGCGA AAGCCGCTTC
CGCGAAGACC TGCTGTATCG CCTGAACGTC ATCACCCTGC ACCTGCCGCC GCTGCGCGAA
CGCAGTGAAG ACATCCTCAC CCTGGCCGAC CGCTTTCTCG CCCGCTTCGT CAAGGAATAC
TCTCGCCCCG CCCGCGGTTT CAGTGACGAG GCGCGCGCTG CGCTGCTCAA CTATCGCTGG
CCCGGCAACA TTCGCGAACT GCGCAACGTC GTGGAACGGG CCAGCATCAT CTGCCCACAG
GAGCGTGTGG AAATCAGCCA CCTGGGCATG GGTGAGCAAC CCACCGGCAA TGCGCCACGC
GTGGGTGCCG CGCTTAGCCT GGATGAGCTG GAGCGCGCGC ATATCGGTGC CGTGCTGGCC
GCCAGCGATA CCCTCGACCA AGCGGCCAAG ACCTTGGGCA TCGATGCCTC CACCCTGTAC
CGCAAGCGCA AGCAGTACAA CCTGTGA
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| Protein sequence | MESAQDNQGR ILLVDDESAI LRTFRYCLED EGYSVATANS AAQAESLLQR QVFDLCFLDL
RLGEDNGLDV LAQMRIQAPW MRVVIVTAHS AIDTAVDAIQ AGAADYLVKP CSPDQLRLAT
AKQLEVRQLS ARLEALEGEI RKPKDGLDSH SPAMMAVLET ARQVATTDAN ILILGESGTG
KGELARAIHG WSKRARKACV TINCPSLNAE LMESELFGHT RGAFTGASES TLGRVSQADG
GTLFLDEIGD FPLTLQPKLL RFIQDKEYER VGDPVTRRAD VRILAATNLN LEEMVRESRF
REDLLYRLNV ITLHLPPLRE RSEDILTLAD RFLARFVKEY SRPARGFSDE ARAALLNYRW
PGNIRELRNV VERASIICPQ ERVEISHLGM GEQPTGNAPR VGAALSLDEL ERAHIGAVLA
ASDTLDQAAK TLGIDASTLY RKRKQYNL
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