| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0958 |
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| Symbol | |
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| ID | 7970133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1054025 |
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| End bp | 1055566 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644791554 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_002942875 |
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| Protein GI | 239813965 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCGCC CGGCCAACAT CCTGGTCATC GATGACGAGC CCGACCTGCG CACGCTGTAC
GAACTGACCC TGCTGCGCGA AGGCTATCGC GTCGAGGCCG CCGGCAGCGT GTCGGAAGCC
TGGCAGCACC TGGAGGCGGG GCAGTTCGAT GCGGTGATCA CCGACATGCG GCTGCCCGAT
GGACAGGGCA TGGAAATCAT CCACCGCATC CAGAAGAACC AGCGCAGCGA GCGCTGCGTG
GTGATGACGG CCTACGGCTC GGCCGAGAAC GCGGTCGAGG CGCTGAAGGC CGGCGCCTTC
GACTACCTGA CCAAGCCGGT CGACCTGAAG CAGTTCCGCG CCGTGGTCGC GTCCGCGGTG
CAGGCGCAGC AGGCAGCGCC GGCCAAGGCC TGGCAGGCGG CGCCCGCGGA CCCGTTGCGC
GCCGGCGCGC CGGCCGTTCC GGACAGCGGC GTCGCCGCGC TCGAGCGGCT GGTGGGCGAC
TCGGAGCCGA TGCGCCTGGT CAAGTCGCGC ATCGCCAAGG TGGCGCGCGG CATGGCGCCG
GTGCTGGTGC GCGGCGAATC GGGCACCGGC AAGGAACTGG TGGCGCGCGC CGTGCATGCC
TGCAGCCAGC GCAGCGAGGG CCCCTTCGTC GCGGTCAACT GCGGCGCCAT TCCCGAGAAC
CTGCTCGAGG CCGAGTTCTT CGGCGCCCGC AAGGGCTCCT ACACCGGCTC GTCGCAGGAC
CGCGACGGCT ACTTCCAGGC CGCGCGCGGC GGCACGCTCT TTCTCGACGA AATCGGCGAC
CTGCCGCTGG CGATGCAGTC CAAGCTGCTG CGTGCGATCC AGGAGCGCAG CGTGCGCTCC
ATCGGCTCGA CGCAGGAAGA CGCGGTCGAC GTGCGCATCG TGAGCGCCAC CCACAAGGAT
CTCCATGCCG AAGTCCAGGC CGGCCGCTTC CGGCAGGACC TGTTCTACCG GCTCAACGTG
ATCGAGATCG CGGTACCCGC GCTGCGCGAC CGGCGCGAGG ACCTGCCCGC GCTTTGCGCC
GCGCTGCTCG CGCGCATTGC GCAGGACGGC GGGCTGCCGG TGCCGCATCT TTCCGCCGAA
CTGCTGCGCC GCCTGGCCCA GCACCGGCTC GACGGCAACG TGCGGGAGCT CGAGAACCTG
CTGCACCGCG CGGTGGCGCT CAACGACGGC GACGAACTGC ACCTGGACCT GATGGCGCCG
CGGCCGGAGG CTGCCGAGGC ACCGGCCGAG ACGGCCATCG CCGAACCCGC GCCCTCTTCT
GCCGCCGCGG CCGGCGGCGA AGCGCCTCGG GCGGCCGCTG CGCCCGCCGC GGAATCCAAG
CCTGTGGCGC CCGCCCTCCC CTCGGACCTG CAGGCCTACC TCGATCAGCA GGAGCGCGAG
ATCCTCGTGC GCGCGCTGCA CGAAAGCGGC TTCAATCGAA CGGCCGCCGC CGCGCGGCTC
GGCATGAGCC TGCGCCAGAT CCGCTACCGC ATCGCGCGGC TGGGCATCAC CACGCCCGGC
GGCGACGAAG GTGCCAGCAG CACCAGCCAT GCCGACGACT GA
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| Protein sequence | MQRPANILVI DDEPDLRTLY ELTLLREGYR VEAAGSVSEA WQHLEAGQFD AVITDMRLPD
GQGMEIIHRI QKNQRSERCV VMTAYGSAEN AVEALKAGAF DYLTKPVDLK QFRAVVASAV
QAQQAAPAKA WQAAPADPLR AGAPAVPDSG VAALERLVGD SEPMRLVKSR IAKVARGMAP
VLVRGESGTG KELVARAVHA CSQRSEGPFV AVNCGAIPEN LLEAEFFGAR KGSYTGSSQD
RDGYFQAARG GTLFLDEIGD LPLAMQSKLL RAIQERSVRS IGSTQEDAVD VRIVSATHKD
LHAEVQAGRF RQDLFYRLNV IEIAVPALRD RREDLPALCA ALLARIAQDG GLPVPHLSAE
LLRRLAQHRL DGNVRELENL LHRAVALNDG DELHLDLMAP RPEAAEAPAE TAIAEPAPSS
AAAAGGEAPR AAAAPAAESK PVAPALPSDL QAYLDQQERE ILVRALHESG FNRTAAAARL
GMSLRQIRYR IARLGITTPG GDEGASSTSH ADD
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