| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1020 |
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| Symbol | |
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| ID | 6177165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1109913 |
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| End bp | 1111298 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641680772 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001807727 |
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| Protein GI | 172060075 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACACG CCCTGATTGT CGAAGACGAT CCCAACAGTC TGTCCGGCCT GACCGCGCTG
CTTGCCGCAG ACGGCTTCTC GGTCGACACG GCCACGTCGC TCGCCGAGGC ACGCATGGCG
CTCGGCCGCT CGATTCCCGA TGTCGTCCTC GTCGACCTGA ACCTGCCGGA CGGCAGCGGG
TTCGACCTGC TCCAGCACCT GCCGCAACAG CAGCCGAACG GGTCGCTGCC GGTGATCGTG
CTGACGGGCA ACGCGACGGT GGAGAGCGCG ATCGAAGGCC TGCGTCACGG TATCTGGGAC
TATCTGCTGA AGCCGATCAA CATTCCGCGC CTGCGCAGCC TGCTGGCCCG GATTCCGCGG
CCCTATGAAC TGATCGACGA AGTGCGGACG CTGCGCGCGT CGCTGCGCCA CCTCGGCCGC
TTCGGCGCGC TGGTCGGCCG CAGCGAGGCG ATGCAGCACG TGTACGACAT GATCGAGCAC
AACGCGGGCA CCGAAACGGC CGTGCTGTTC GCAGGCGAGG CCGGCACCGG CAAGAAGCTG
GCCGCGCGCA CGCTGCACGA CCTGAGCCGG CGCCGCAAGG GGCCGTTCGT GTCGTTCGAC
TGCCGCACGA TCGCGCAAGC CGGCCGTCAC GGCGCGTCGC TCGACAGCAT CCTGTTCGGT
CATGAGCGCG GCGCGTTCGA CGGCGCCGAG CGGCGCGAAT CGGGCCTGTT CGAACAGGCC
GGCGGCGGCA CGCTGTGCCT CGACGAGATC ACCGCACTGC CGCTCGTGCT GCAGGAGGCG
CTGCTGCATG CGCTCGACTC GCAGAACTTC ATGCGGATCG GCGGCACGAG CTCGATCGCG
AGCGACTTCC GGCTGATCGC GACCACGCGG CGCCCGGCCC GCGACGCGGT CGCGAACGGC
CTGCTGCGCG AGGATCTGTG GCTGCGCCTC GATGCGGCAT CGATCACGAT GCCGCCGCTG
CGCGAGCGCG ACGGCGATGC GCTCGCCATC GCGGATTCCC TCATCGACGA ACTGAACCGC
GACGCGCGCG CTACCGGCCG CGGCACGACC GACAAGCGCG CGGCGCAGGG CTTCGTGCGC
GAATGCCTGT CCTACGAATG GCCCGGCAAC GTGCGCGAAC TGCAGGAGCG CGTGCGCTTC
GCCTATGACG CGTCCGGCGA CTTCATCGAG ACGCTGCGCG CGGGCGAAGC GAGCTTCGCG
GCCGGCGCCG CACTGAACGG TAGCAGCGTG CAGATCAAGG TCGGCACCCC GCTGTCCGAC
GTCGAGGATC TCTTGATCCG CGCAACGCTC GACGCGGTCG GCGGCACGCG CCATCGCGCG
GCGACGCTGC TCGGCATCAG CCCCAAGACG CTGTACAACA AGCTGCAGCG GATGAAGGTC
AACTGA
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| Protein sequence | MPHALIVEDD PNSLSGLTAL LAADGFSVDT ATSLAEARMA LGRSIPDVVL VDLNLPDGSG
FDLLQHLPQQ QPNGSLPVIV LTGNATVESA IEGLRHGIWD YLLKPINIPR LRSLLARIPR
PYELIDEVRT LRASLRHLGR FGALVGRSEA MQHVYDMIEH NAGTETAVLF AGEAGTGKKL
AARTLHDLSR RRKGPFVSFD CRTIAQAGRH GASLDSILFG HERGAFDGAE RRESGLFEQA
GGGTLCLDEI TALPLVLQEA LLHALDSQNF MRIGGTSSIA SDFRLIATTR RPARDAVANG
LLREDLWLRL DAASITMPPL RERDGDALAI ADSLIDELNR DARATGRGTT DKRAAQGFVR
ECLSYEWPGN VRELQERVRF AYDASGDFIE TLRAGEASFA AGAALNGSSV QIKVGTPLSD
VEDLLIRATL DAVGGTRHRA ATLLGISPKT LYNKLQRMKV N
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