More than 300 homologs were found in PanDaTox collection
for query gene TBFG_13788 on replicon NC_009565
Organism: Mycobacterium tuberculosis F11



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009565  TBFG_13788  osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport system permease protein proZ  100 
 
 
239 aa  450  1.0000000000000001e-126  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.991425 
 
 
-
 
NC_009077  Mjls_5345  binding-protein-dependent transport systems inner membrane component  73.22 
 
 
264 aa  275  4e-73  Mycobacterium sp. JLS  Bacteria  normal  0.214986  normal 
 
 
-
 
NC_008146  Mmcs_4964  binding-protein-dependent transport systems inner membrane component  73.22 
 
 
264 aa  275  4e-73  Mycobacterium sp. MCS  Bacteria  normal  0.517846  n/a   
 
 
-
 
NC_008705  Mkms_5052  binding-protein-dependent transport systems inner membrane component  73.22 
 
 
264 aa  275  4e-73  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1210  binding-protein-dependent transport systems inner membrane component  74.78 
 
 
257 aa  255  5e-67  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5598  binding-protein-dependent transport systems inner membrane component  73.87 
 
 
264 aa  247  9e-65  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_2840  binding-protein-dependent transport systems inner membrane component  54.59 
 
 
248 aa  189  2e-47  Arthrobacter sp. FB24  Bacteria  decreased coverage  0.00306406  n/a   
 
 
-
 
NC_011886  Achl_2555  binding-protein-dependent transport systems inner membrane component  53.62 
 
 
248 aa  186  4e-46  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000304534 
 
 
-
 
NC_013172  Bfae_30020  ABC-type proline/glycine betaine transport system, permease component  50.79 
 
 
223 aa  170  2e-41  Brachybacterium faecium DSM 4810  Bacteria  normal  0.115362  n/a   
 
 
-
 
NC_013093  Amir_6269  binding-protein-dependent transport systems inner membrane component  55.87 
 
 
243 aa  162  5.0000000000000005e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3634  binding-protein-dependent transport systems inner membrane component  43.93 
 
 
229 aa  158  6e-38  Thermomonospora curvata DSM 43183  Bacteria  normal  0.737383  n/a   
 
 
-
 
NC_013595  Sros_8179  proline/glycine betaine ABC transporter  47.11 
 
 
223 aa  155  7e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1292  binding-protein-dependent transport systems inner membrane component  56.74 
 
 
251 aa  154  1e-36  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_1404  binding-protein-dependent transport systems inner membrane component  50.21 
 
 
258 aa  149  4e-35  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.848892 
 
 
-
 
NC_011989  Avi_0503  ABC transporter  44.84 
 
 
225 aa  147  1.0000000000000001e-34  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0399  binding-protein-dependent transport systems inner membrane component  45.83 
 
 
225 aa  147  1.0000000000000001e-34  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2260  binding-protein-dependent transport systems inner membrane component  48.54 
 
 
227 aa  145  5e-34  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.360102 
 
 
-
 
NC_013169  Ksed_26240  ABC-type proline/glycine betaine transport system, permease component  47.6 
 
 
230 aa  145  6e-34  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.408698  normal  0.833764 
 
 
-
 
NC_013131  Caci_3085  binding-protein-dependent transport systems inner membrane component  43.5 
 
 
225 aa  143  2e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.416296  normal  0.12861 
 
 
-
 
NC_013421  Pecwa_4555  binding-protein-dependent transport systems inner membrane component  43.24 
 
 
226 aa  135  4e-31  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2522  binding-protein-dependent transport systems inner membrane component  36.17 
 
 
211 aa  120  1.9999999999999998e-26  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.241712  n/a   
 
 
-
 
NC_009487  SaurJH9_2474  binding-protein-dependent transport systems inner membrane component  36.17 
 
 
211 aa  120  1.9999999999999998e-26  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.13842  n/a   
 
 
-
 
NC_013521  Sked_37580  ABC-type proline/glycine betaine transport system, permease component  39.91 
 
 
228 aa  119  3e-26  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3263  binding-protein-dependent transport systems inner membrane component  42.04 
 
 
229 aa  117  9.999999999999999e-26  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0142604 
 
 
-
 
NC_013730  Slin_0317  binding-protein-dependent transport systems inner membrane component  39.33 
 
 
519 aa  116  3.9999999999999997e-25  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.417886 
 
 
-
 
NC_002976  SERP2357  amino acid ABC transporter, permease protein  35.64 
 
 
211 aa  115  5e-25  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1035  binding-protein-dependent transport systems inner membrane component  39.91 
 
 
236 aa  114  1.0000000000000001e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.163683 
 
 
-
 
NC_009523  RoseRS_1817  binding-protein-dependent transport systems inner membrane component  46.76 
 
 
217 aa  114  2.0000000000000002e-24  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0299279 
 
 
-
 
NC_009972  Haur_0349  binding-protein-dependent transport systems inner membrane component  36.24 
 
 
217 aa  112  5e-24  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000441273  n/a   
 
 
-
 
NC_011898  Ccel_3333  Substrate-binding region of ABC-type glycine betaine transport system  32.09 
 
 
524 aa  111  9e-24  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000937167  n/a   
 
 
-
 
NC_002976  SERP2030  amino acid ABC transporter, permease protein  33.18 
 
 
211 aa  111  1.0000000000000001e-23  Staphylococcus epidermidis RP62A  Bacteria  normal  0.207242  n/a   
 
 
-
 
NC_009380  Strop_4289  binding-protein-dependent transport systems inner membrane component  42.92 
 
 
244 aa  110  2.0000000000000002e-23  Salinispora tropica CNB-440  Bacteria  normal  0.729168  normal  0.839045 
 
 
-
 
NC_004116  SAG0243  amino acid ABC transporter, permease protein  33.85 
 
 
211 aa  108  5e-23  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0983  binding-protein-dependent transport systems inner membrane component  40.68 
 
 
217 aa  108  7.000000000000001e-23  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.762927  n/a   
 
 
-
 
NC_012669  Bcav_2670  binding-protein-dependent transport systems inner membrane component  38.12 
 
 
230 aa  107  2e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.538253  normal  0.0824918 
 
 
-
 
NC_013411  GYMC61_1174  binding-protein-dependent transport systems inner membrane component  35.96 
 
 
209 aa  106  4e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008254  Meso_2980  binding-protein-dependent transport systems inner membrane component  33.71 
 
 
211 aa  106  4e-22  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2528  binding-protein-dependent transport systems inner membrane component  39.13 
 
 
217 aa  105  8e-22  Roseiflexus castenholzii DSM 13941  Bacteria  normal  hitchhiker  0.00802547 
 
 
-
 
NC_012803  Mlut_15730  ABC-type proline/glycine betaine transport system, permease component  41.67 
 
 
251 aa  105  9e-22  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0770  binding-protein-dependent transport systems inner membrane component  36.02 
 
 
222 aa  104  1e-21  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_1339  binding-protein-dependent transport systems inner membrane component  39.9 
 
 
255 aa  104  1e-21  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.889629  hitchhiker  0.000819014 
 
 
-
 
NC_013517  Sterm_1515  Substrate-binding region of ABC-type glycine betaine transport system  30.7 
 
 
526 aa  104  1e-21  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.0692577  n/a   
 
 
-
 
NC_009953  Sare_4724  binding-protein-dependent transport systems inner membrane component  41.82 
 
 
244 aa  104  1e-21  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000283909 
 
 
-
 
NC_010001  Cphy_0119  substrate-binding region of ABC-type glycine betaine transport system  33.94 
 
 
523 aa  103  2e-21  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000124345  n/a   
 
 
-
 
NC_013757  Gobs_0624  binding-protein-dependent transport systems inner membrane component  44.17 
 
 
243 aa  103  2e-21  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1814  binding-protein-dependent transport systems inner membrane component  37.22 
 
 
213 aa  102  6e-21  Roseiflexus sp. RS-1  Bacteria  normal  0.518824  normal  0.0107204 
 
 
-
 
NC_010003  Pmob_1127  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
216 aa  102  6e-21  Petrotoga mobilis SJ95  Bacteria  normal  0.721959  n/a   
 
 
-
 
NC_012793  GWCH70_0296  binding-protein-dependent transport systems inner membrane component  34.83 
 
 
211 aa  101  1e-20  Geobacillus sp. WCH70  Bacteria  normal  0.4946  n/a   
 
 
-
 
NC_009727  CBUD_1923  glycine betaine transport system permease protein  33 
 
 
526 aa  101  1e-20  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0352  binding-protein-dependent transport systems inner membrane component  34.29 
 
 
212 aa  100  2e-20  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00133912  n/a   
 
 
-
 
NC_011729  PCC7424_1223  Substrate-binding region of ABC-type glycine betaine transport system  39.27 
 
 
512 aa  99  5e-20  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013037  Dfer_1250  binding-protein-dependent transport systems inner membrane component  34.94 
 
 
525 aa  99  5e-20  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.615651  normal  0.522042 
 
 
-
 
NC_010320  Teth514_1202  binding-protein-dependent transport systems inner membrane component  31.41 
 
 
212 aa  99  6e-20  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_5205  Substrate-binding region of ABC-type glycine betaine transport system  38.5 
 
 
537 aa  98.6  7e-20  Haliangium ochraceum DSM 14365  Bacteria  normal  0.057164  normal 
 
 
-
 
NC_013204  Elen_0084  Substrate-binding region of ABC-type glycine betaine transport system  31.73 
 
 
528 aa  98.6  8e-20  Eggerthella lenta DSM 2243  Bacteria  normal  0.689632  normal 
 
 
-
 
NC_013132  Cpin_4963  binding-protein-dependent transport systems inner membrane component  35.35 
 
 
522 aa  98.2  9e-20  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0875398  normal  0.252786 
 
 
-
 
NC_011830  Dhaf_2803  binding-protein-dependent transport systems inner membrane component  35.15 
 
 
218 aa  98.2  9e-20  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000135531  n/a   
 
 
-
 
NC_013517  Sterm_3032  Substrate-binding region of ABC-type glycine betaine transport system  24.32 
 
 
531 aa  98.6  9e-20  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.367999  n/a   
 
 
-
 
NC_008148  Rxyl_0579  binding-protein-dependent transport systems inner membrane component  35.08 
 
 
217 aa  97.8  1e-19  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.584474  n/a   
 
 
-
 
NC_010117  COXBURSA331_A0267  quaternary amine ABC transporter periplasmic substrate-binding protein  32.02 
 
 
526 aa  96.3  3e-19  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_1070  substrate-binding region of ABC-type glycine betaine transport system  36.02 
 
 
525 aa  96.7  3e-19  Maricaulis maris MCS10  Bacteria  normal  0.019749  normal 
 
 
-
 
NC_009767  Rcas_2531  binding-protein-dependent transport systems inner membrane component  34.47 
 
 
213 aa  96.7  3e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.41546  hitchhiker  0.00151664 
 
 
-
 
NC_009513  Lreu_0185  binding-protein-dependent transport systems inner membrane component  32.5 
 
 
221 aa  96.3  4e-19  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2944  binding-protein-dependent transport systems inner membrane component  34.13 
 
 
400 aa  95.5  6e-19  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.543286  n/a   
 
 
-
 
NC_002976  SERP0386  ABC transporter, permease protein  32.48 
 
 
504 aa  94.7  1e-18  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1686  binding-protein dependent transport system inner membrane protein  34.5 
 
 
207 aa  94.4  1e-18  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.038351  normal  0.407571 
 
 
-
 
NC_008527  LACR_0914  choline ABC transporter permease and substrate binding protein  29.08 
 
 
500 aa  94.4  2e-18  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.222381  n/a   
 
 
-
 
NC_009505  BOV_0213  ABC transporter, permease protein  34.87 
 
 
248 aa  93.6  3e-18  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR0222  ABC transporter, permease protein  34.87 
 
 
248 aa  93.6  3e-18  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0296  binding-protein-dependent transport systems inner membrane component  36.17 
 
 
248 aa  93.2  3e-18  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0454  binding-protein-dependent transport systems inner membrane component  39.49 
 
 
257 aa  93.2  3e-18  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1634  binding-protein-dependent transport systems inner membrane component  39.71 
 
 
261 aa  92.8  4e-18  Salinispora tropica CNB-440  Bacteria  normal  0.649793  normal  0.788807 
 
 
-
 
NC_008148  Rxyl_0578  binding-protein-dependent transport systems inner membrane component  37.34 
 
 
235 aa  92.8  4e-18  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0139749  n/a   
 
 
-
 
NC_009487  SaurJH9_0746  substrate-binding region of ABC-type glycine betaine transport system  35.51 
 
 
504 aa  92.4  5e-18  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0763  substrate-binding region of ABC-type glycine betaine transport system  35.51 
 
 
504 aa  92.4  5e-18  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.458546  n/a   
 
 
-
 
NC_008148  Rxyl_0984  binding-protein-dependent transport systems inner membrane component  37.34 
 
 
236 aa  92.4  5e-18  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.660466  n/a   
 
 
-
 
NC_009436  Ent638_1924  binding-protein-dependent transport systems inner membrane component  36.27 
 
 
245 aa  92.4  6e-18  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_1155  binding-protein-dependent transport systems inner membrane component  40.68 
 
 
213 aa  92  6e-18  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_1125  binding-protein-dependent transport systems inner membrane component  29.51 
 
 
218 aa  92  7e-18  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3373  Substrate-binding region of ABC-type glycine betaine transport system  35 
 
 
489 aa  91.7  1e-17  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4640  binding-protein-dependent transport systems inner membrane component  34.09 
 
 
246 aa  90.9  2e-17  Sinorhizobium medicae WSM419  Bacteria  normal  0.0951209  normal  0.118631 
 
 
-
 
NC_009953  Sare_1621  binding-protein-dependent transport systems inner membrane component  35.2 
 
 
261 aa  90.9  2e-17  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001529  probable inner-membrane permease  31.96 
 
 
199 aa  90.9  2e-17  Vibrio sp. Ex25  Bacteria  normal  0.90895  n/a   
 
 
-
 
NC_009621  Smed_5106  binding-protein-dependent transport systems inner membrane component  31.38 
 
 
220 aa  90.1  3e-17  Sinorhizobium medicae WSM419  Bacteria  normal  0.485727  normal  0.10095 
 
 
-
 
NC_007952  Bxe_B2995  glycine betaine/choline/proline ABC transporter inner membrane protein  34.22 
 
 
238 aa  89  5e-17  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_3777  Substrate-binding region of ABC-type glycine betaine transport system  35.91 
 
 
520 aa  89.4  5e-17  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009621  Smed_5104  binding-protein-dependent transport systems inner membrane component  35.26 
 
 
251 aa  89.4  5e-17  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.245299 
 
 
-
 
NC_013745  Htur_4757  binding-protein-dependent transport systems inner membrane component  31.5 
 
 
228 aa  89  6e-17  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
NC_013093  Amir_2050  binding-protein-dependent transport systems inner membrane component  38.17 
 
 
258 aa  89  6e-17  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013745  Htur_4755  binding-protein-dependent transport systems inner membrane component  33.52 
 
 
224 aa  89  7e-17  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
NC_010625  Bphy_6869  binding-protein-dependent transport systems inner membrane component  30.43 
 
 
294 aa  88.6  7e-17  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_5761  binding-protein-dependent transport systems inner membrane component  29.73 
 
 
295 aa  88.6  8e-17  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_3299  Substrate-binding region of ABC-type glycine betaine transport system  35 
 
 
490 aa  88.6  9e-17  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2912  binding-protein-dependent transport systems inner membrane component  34.39 
 
 
250 aa  88.2  1e-16  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.105441 
 
 
-
 
NC_011772  BCG9842_B3062  glycine betaine/L-proline ABC transporter, permease and substrate-binding protein  36.23 
 
 
503 aa  88.2  1e-16  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0538  glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein  29.61 
 
 
517 aa  87.8  1e-16  Clostridium perfringens ATCC 13124  Bacteria  normal  0.863672  n/a   
 
 
-
 
NC_008262  CPR_0522  glycine betaine/carnitine/choline ABC transporter, permease/substrate-binding protein  29.61 
 
 
517 aa  88.2  1e-16  Clostridium perfringens SM101  Bacteria  normal  0.271995  n/a   
 
 
-
 
NC_010465  YPK_2864  binding-protein-dependent transport systems inner membrane component  29.8 
 
 
384 aa  87.4  2e-16  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2100  substrate-binding region of ABC-type glycine betaine transport system  35.51 
 
 
503 aa  87.4  2e-16  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0700074  n/a   
 
 
-
 
NC_011083  SeHA_C1664  binding-protein-dependent transport systems inner membrane component  35.33 
 
 
236 aa  87.4  2e-16  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
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