Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_3777 |
Symbol | |
ID | 7103996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | + |
Start bp | 3965592 |
End bp | 3967154 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643476782 |
Product | Substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_002373883 |
Protein GI | 218248512 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGTT TTTATGATGC TCAATTATTG CAAGAGATTA TTCAACGAAC AGTTGAACAT TTAATCTTAG TAAGTATTGC TATGGGGGCA GCGATCGCAG TGGGTATCCC TTTAGGCATT ATTATTGCTA AACAGCCTAA ATTAGCTGAT CCTATTTTGG GAGTTGCAAA TGCCATTCAA ACGATTCCTA GTTTAGCCAT TTTTGGCTTT TTAATTACCG TTCCCATCAT TGGAGGAATT GGTAAAATTC CCGCGATTGT TGCCCTAATT CTCTATGCTT TATTGCCTAT TATTCGTAAT ACTTATACAG GGATAAAGCA AGTGGATAAA GGAGTGAAAG AAGCAGCAAT AGCCCTAGGA ATGACAAACC GACAAATATT ACTCTTAATT GAAATCCCCT TAGCGTTAGG TATTATTTTA GCCGGAGTTA GAGTTTCTAC CGTCATTTGT GTGGGAATTA CGACCATTGC TGCTGCTATT GGGGCAGGAG GGTTAGGGGT GTTTATTTTT CGGGGAATTT CCATGGTTAA TAACCAAATT ATCCTCGCTG GTGCTATTCC ATCAGCTATC ATTGCTTTAG CAGCAGATTG GGGAATTGGT TGGCTGGAAA AATCCCTAAG TCAGCACAAG ACAAATCAAC AAAAATCCAA TAAAAAAAGC TTAATTATTT TTGGAATATT AGGATTGATT TTATTTAGTT TATTGGGAAT TTTTCATCAA AAAATATTTT TAACAAATCA AGCCAGTGGT ATCGTAATTA TTGGCTCTAA AAATTTTACT GAGCAGGTGA TTTTAGGAGA AGTATTAGCC CAAAGTATTG AAGCAAAAAC GAATTTAAAA GTAGACAGAA AATTTAATTT AGGGGGAACT TTTATTTGTC ATCAAGCATT ACAAGCGAGA AAAATTGATG GATATGTAGA ATATACAGGA ACCGCTTTTA CCGCAATTCT TGAACAGAAA CCCATTAATA ATCCTCAAAC TGTTTATGAA AAAATTAAAC AAGTGTATCA TGATCAATTT AACCTAGAAG TCATGCCATC TCTAGGATTT GAAAATACCT ATGCTATTCT CGTTCGTCAA AAAGATGCCA AACAATATCA ACTAAAAACT ATCTCAGATG CGTCTCAATA TAGCCCCCAA TGGCAAGCAG GATTTGGTCA TGAATTTTTA TCAAGAGAAG ACGGTTATCC AGGGTTAGCC AAAACCTATA ATTTAAACTT TGCGACACTT CCAAAAACCA TGGAACTCGG TTTAATGTAT CGCGCTTTAG CTAATCAAGA AATCGATTTA GCAGCAGGAA ATTCTACTGA TGGAACAATT CCTATTTTAA ATTTAACGAT TTTAGAAGAT AATAAAAAGT ATTTTCCTCC CTATGAAGCA GTCCCGATTT TTAATCAAGA AACTTTCAAA GACTATCCTA ACTTAAGGTC TATTATTGAA CAATTAGCGG GAAAAATTTC CGCCCAAGAA ATGCAACAAC TCAATTATCA AGTGGATGGG GAGAAAAAAT CAGTTAATGA AGTAGTACAC AAGTTTTTAA TCAAGAAGGG GTTAACATCT TAA
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Protein sequence | MNSFYDAQLL QEIIQRTVEH LILVSIAMGA AIAVGIPLGI IIAKQPKLAD PILGVANAIQ TIPSLAIFGF LITVPIIGGI GKIPAIVALI LYALLPIIRN TYTGIKQVDK GVKEAAIALG MTNRQILLLI EIPLALGIIL AGVRVSTVIC VGITTIAAAI GAGGLGVFIF RGISMVNNQI ILAGAIPSAI IALAADWGIG WLEKSLSQHK TNQQKSNKKS LIIFGILGLI LFSLLGIFHQ KIFLTNQASG IVIIGSKNFT EQVILGEVLA QSIEAKTNLK VDRKFNLGGT FICHQALQAR KIDGYVEYTG TAFTAILEQK PINNPQTVYE KIKQVYHDQF NLEVMPSLGF ENTYAILVRQ KDAKQYQLKT ISDASQYSPQ WQAGFGHEFL SREDGYPGLA KTYNLNFATL PKTMELGLMY RALANQEIDL AAGNSTDGTI PILNLTILED NKKYFPPYEA VPIFNQETFK DYPNLRSIIE QLAGKISAQE MQQLNYQVDG EKKSVNEVVH KFLIKKGLTS
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