Gene Rxyl_0983 details

Gene Information

• Locus tag: Rxyl_0983
• ID: 4117214
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: -
• Start bp: 1021115
• End bp: 1021768
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 638035767
• Product: binding-protein-dependent transport systems inner membrane component
• Protein accession: YP_643761
• Protein GI: 108803824
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1174] ABC-type proline/glycine betaine transport systems, permease component

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.762927
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGGGCA TCCTGCAGGT GTTCCTGCGG CCGCAGTTCC CGGGGCTGCT GCTCACCCAC 
GTGGAGCTCT CCGCGCTCGC CGTGGCCCTC GCCACGCTCG TCGCCCTCCC GGTGGCGCTC 
GCGGTGCGCA ACAGCCCCCT GGGGACCGCA ATCGCCGTCA ACGCCGGCAA CGTGGGGCGG 
GCGGTGCCCT CGCTGGCGCT CCTGGCGCTC GCGCTGCCCT TTCTGGGGTT CGGGTTCGCG 
CCCTCGCTCG TCGCGCTCAC CGCGCTCGCC GTCCCCCCCA TCCTCATCAA CGCCACCACC 
GGGCTGCGGG AGGTCAGCGG CGAGGTGGTG GACGCCGCGC GCGGCATGGG GCTCTCCGAG 
GCCCAGATCC TGCGCGACAT CCAGCTGCCC ATGGCCGCGC CGGTGGTCTT CGCGGGGGTG 
CGCACCTCGG CGGTGCAGGT GGTGGCGAGC GCCACCCTGG CCACCTTTAT CGGGGGAGGG 
GGGCTGGGGA ACCTGATCGT GGAGGGCTTC CAGCGGGGCG ACGAGGCGAT CCTGCTGGCC 
GGGGCCATCT CGGTGGCGGC GCTGGCGGTG GCCACGGAGG CGCTCTTCGG CGCCCTGGAG 
CGGGCGCTCA CCCCGAAGGG GCTGCGCCTG GCCCGGAGAA GGCGGACGAA GTAA 

 

Protein sequence

MEGILQVFLR PQFPGLLLTH VELSALAVAL ATLVALPVAL AVRNSPLGTA IAVNAGNVGR 
AVPSLALLAL ALPFLGFGFA PSLVALTALA VPPILINATT GLREVSGEVV DAARGMGLSE 
AQILRDIQLP MAAPVVFAGV RTSAVQVVAS ATLATFIGGG GLGNLIVEGF QRGDEAILLA 
GAISVAALAV ATEALFGALE RALTPKGLRL ARRRRTK