Gene Bfae_30020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_30020 
Symbol 
ID8401546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp3396753 
End bp3397424 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content73% 
IMG OID644999034 
ProductABC-type proline/glycine betaine transport system, permease component 
Protein accessionYP_003156353 
Protein GI257070098 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.115362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGCA ACCCCTTCCT GGACTCCCTC GACTGGCTCG GCGACCCGCT GCGCTGGTCC 
GGTCCCGACG GGATCCCGCT GCGCACCCTC GAGCACCTCG GCTACACCGC GCTCGGGGTC
CTCGTGGCCG CGCTGCTCGC GGTGCCCATC GGCCTGTACG TCGGCCACAC GGGCCGGTTC
AAGGGCCTCG CGGTCGCCGC CGCCGGTGCC GCCCGCGCCC TGCCCACCCT GGGCCTGGTC
ACCCTGTTCG CCCTGCTGCT CGGCATCGGG CTCACGGCCC CGCTGGCCTC CTTCGTGATC
CTCGCGATCC CGTCGCTGCT GGCCGGCGCC TACTCCGCCA TCGAATCCGC GGACCCCGCC
ACCGTCGACG CCGCCCGCGC CCAGGGCATG ACCGAGCTGC AGATCCTCAC CCGGGTCGAG
ATCCCGCTGG GCATGCCGCT GCTGATCGGC GGATTCCGCG GAGCGACCGT GCAGGTGGTG
GCCACCGCGA TGCTCGCCGC CTACGTCGGC AACGGGGGGC TGGGGCGGTA CATCTTCCAG
GGCCTGGGCT CGCAGAACTA CCCGCAGATG ATCGCCGGCT CGCTGCTGGT GATCGTCCTC
GCGCTCGTGC TGGACCTCGC CCTCCTGCTG ACCCAGCGGA TCACCGCACC GCCCGGGGCG
ACCGCCCCGT GA
 
Protein sequence
MTGNPFLDSL DWLGDPLRWS GPDGIPLRTL EHLGYTALGV LVAALLAVPI GLYVGHTGRF 
KGLAVAAAGA ARALPTLGLV TLFALLLGIG LTAPLASFVI LAIPSLLAGA YSAIESADPA
TVDAARAQGM TELQILTRVE IPLGMPLLIG GFRGATVQVV ATAMLAAYVG NGGLGRYIFQ
GLGSQNYPQM IAGSLLVIVL ALVLDLALLL TQRITAPPGA TAP