| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2531 |
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| Symbol | |
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| ID | 5540013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3263996 |
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| End bp | 3264637 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640894662 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001432629 |
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| Protein GI | 156742500 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.41546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00151664 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTTATC TGATTGACAA CCTTCCCTAT GTGCTGAGCC TGGCAGGGCA GCACCTGCTG
ATGTCGGGCG TAAGCCTTGC GATTGCGCTG GCGATTGCGC TGCCGATGGG GATCATCTGC
GCGCGCGTTG CGTGGCTGCG TAGCCTGGTG CTGGGGATTC TGGGCATTAT CTACACTATT
CCAAGCCTCT CGCTCTTTGT CCTCCTCATT CCCTTCACCG GTCTGGGGCT ACGCCCGGCG
GTGATTGCTT TGGTCGCGTA TGCGCAACTG GTGCTGGTGC GGAATGTGGT CGTCGGGCTG
ACCGGCATCG ACCCGGCGAT TGTCGAAGCG GCGCGCGGCA TGGGAATGAC GGCGCTCCAG
CGGCTGTGGC GGGTGGAACT GCCGCTGGCA TTGCCGATCA TCCTGGCGGG GGTGCGCGTG
GCGACGCTTT CGATCATCGC CATTGGGACG ATTGCAGCAT TCATCAACGC GGGCGGACTC
GGGCTGTTGT TGTTCGATGG CGTGCGCAGC AGCAACCCGG AAAAGATTAT CGCCGGCGCG
GTCGCCGTCA GTGTGCTGGC GATTGGCGCG AATGGCGTGC TGTGGGCAGT CGAGCAGCGC
GCGACGCAGG CGATGCAGGG GGGTAGGGGT TATAAGAACT GA
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| Protein sequence | MRYLIDNLPY VLSLAGQHLL MSGVSLAIAL AIALPMGIIC ARVAWLRSLV LGILGIIYTI
PSLSLFVLLI PFTGLGLRPA VIALVAYAQL VLVRNVVVGL TGIDPAIVEA ARGMGMTALQ
RLWRVELPLA LPIILAGVRV ATLSIIAIGT IAAFINAGGL GLLLFDGVRS SNPEKIIAGA
VAVSVLAIGA NGVLWAVEQR ATQAMQGGRG YKN
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