Gene Ksed_26240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_26240 
Symbol 
ID8374127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2693047 
End bp2693739 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content72% 
IMG OID644992844 
ProductABC-type proline/glycine betaine transport system, permease component 
Protein accessionYP_003150341 
Protein GI256826381 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.408698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.833764 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCG GTGAGGTCGT GGCCTGGCTG ACCGACCCCG CCAGCTGGCA GGGGGAGGAC 
GGCATCTGGA TGCAGGTGCT GCGGCACCTG GCGTACTCGT TCGCGGCGCT CGCCCTGGCC
TGCCTGGTGG CGGTCCCGCT GGGCCTGTGG ATCGGGCACA CGGGCAAGGG CTCGGTGGTG
GCGGTGAACC TGGCCGGGGC GCTGCGTGCG CTGCCCTCGC TGGGTCTGCT GCTGCTGGGG
TGGGTGCTGC TCGCGCCGCA CCTGCCCGGT GATGCTGCGT TCGTGCTGCC GAGCCTCATC
GTGCTGGCCG TGCTGGCGAT CCCCCCGGTG CTCTCGGGGG TGTACTCCGG CATCGCGGAG
GTGGACCCGG CCGCGCGGGA CGCGGCGAAG GGCATGGGGA TGACCGGCAT GCAGGTGCTG
CGGCGGGTGG AGATCCCCGT GGCGCTGCCG TTGATCCTCT CCGGCCTGCG GTCGGGGCTG
CTGCAGATCA TCGCGACCGC CACCATCGCC GCCTACGTCT CCCTCGGCGG GCTGGGGCGC
TACCTCATCG ACGGACTCGC GGCGCGTGAC TACGCGCAGA TGGCCGGCGG GGCGGTACTC
GTGGCGGGCC TGGCGTTGCT GATGGAGCTG GTCTTCACCC TACTGCAAAA GCTCGTCGTG
AGCCCCGGCC TGGCCGACCA GGAGGCACGA TGA
 
Protein sequence
MIAGEVVAWL TDPASWQGED GIWMQVLRHL AYSFAALALA CLVAVPLGLW IGHTGKGSVV 
AVNLAGALRA LPSLGLLLLG WVLLAPHLPG DAAFVLPSLI VLAVLAIPPV LSGVYSGIAE
VDPAARDAAK GMGMTGMQVL RRVEIPVALP LILSGLRSGL LQIIATATIA AYVSLGGLGR
YLIDGLAARD YAQMAGGAVL VAGLALLMEL VFTLLQKLVV SPGLADQEAR