Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1814 |
Symbol | |
ID | 5208773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2240422 |
End bp | 2241063 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640595422 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001276154 |
Protein GI | 148655949 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.518824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0107204 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTACC TGATTGACAA CTTTCCCTAT GTTCTGAGCC TGATCGGGCA GCATCTGGTG ATGTCCGGCT TGAGCCTGGC AATCGCGCTT GTGATTGCGC TGCCCCTGGG GATCGTCTGC GCGCGCGTGA CGCGCCTGCG TAACCTGGTG CTGGGGATTC TGGGGGTGAT CTACACCATC CCCAGTCTGT CGCTCTTCGT GCTCCTCATC CCGTTCACCG GTCTGGGATT GCGTCCGGCG GTCATCGCTC TGGTCGCGTA TGCGCAACTT GTTCTGGTGC GCAATGTCGT CGTTGGTCTG ACCGGGATCG ATCCGGCGAT TGTCGAAGCG GCGCGCGGCA TGGGGATGAC GGCAGCGCAG CGCCTGTGGC GGGTTGAACT ACCGCTGGCG CTGCCGATCA TTCTGGCGGG AGTGCGCGTT GCGATGCTGT CGATCATTGC CATTGGCACA ATTGCGGCAT TCATCAACGC CGGTGGGTTA GGATTACTGT TGTTCGATGG GGTGCGCAGC AGCAATCCTG AGAAGATCAT CGCTGGCGCG GTGGCGGTCA GTGCACTGGC GATCAGCGCC AACGGCATCC TGTGGCTGAT CGAGCAGCGT GTCTTCCAGG CGACGCAGGG GGTGACGGGG ACTAAGAACT GA
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Protein sequence | MRYLIDNFPY VLSLIGQHLV MSGLSLAIAL VIALPLGIVC ARVTRLRNLV LGILGVIYTI PSLSLFVLLI PFTGLGLRPA VIALVAYAQL VLVRNVVVGL TGIDPAIVEA ARGMGMTAAQ RLWRVELPLA LPIILAGVRV AMLSIIAIGT IAAFINAGGL GLLLFDGVRS SNPEKIIAGA VAVSALAISA NGILWLIEQR VFQATQGVTG TKN
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