More than 300 homologs were found in PanDaTox collection
for query gene Sden_3297 on replicon NC_007954
Organism: Shewanella denitrificans OS217



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007954  Sden_3297  chemotaxis sensory transducer  100 
 
 
543 aa  1085    Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1143  histidine kinase, HAMP region: chemotaxis sensory transducer  51.09 
 
 
541 aa  455  1e-127  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1318  methyl-accepting chemotaxis sensory transducer  46.85 
 
 
555 aa  444  1e-123  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  51.57 
 
 
550 aa  423  1e-117  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  47.11 
 
 
551 aa  404  1e-111  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0785  histidine kinase, HAMP region: chemotaxis sensory transducer  49.14 
 
 
551 aa  392  1e-107  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.367078  normal 
 
 
-
 
NC_009439  Pmen_1567  methyl-accepting chemotaxis sensory transducer  45.09 
 
 
547 aa  379  1e-104  Pseudomonas mendocina ymp  Bacteria  normal  0.0467505  normal 
 
 
-
 
NC_010524  Lcho_0333  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  69.58 
 
 
720 aa  344  2.9999999999999997e-93  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010524  Lcho_3799  methyl-accepting chemotaxis sensory transducer  72.66 
 
 
772 aa  338  1.9999999999999998e-91  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  42.33 
 
 
576 aa  337  5e-91  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_013173  Dbac_2647  methyl-accepting chemotaxis sensory transducer  40.31 
 
 
554 aa  332  8e-90  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.910941  n/a   
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  40.48 
 
 
558 aa  331  2e-89  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2323  methyl-accepting chemotaxis protein  54.52 
 
 
646 aa  327  2.0000000000000001e-88  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  55.12 
 
 
677 aa  325  1e-87  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_011769  DvMF_1209  methyl-accepting chemotaxis sensory transducer  51.44 
 
 
659 aa  324  3e-87  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.261932 
 
 
-
 
NC_011891  A2cp1_3671  methyl-accepting chemotaxis sensory transducer  42.05 
 
 
509 aa  320  3e-86  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.353813  n/a   
 
 
-
 
NC_007760  Adeh_1160  methyl-accepting chemotaxis sensory transducer  56.17 
 
 
532 aa  321  3e-86  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4039  methyl-accepting chemotaxis sensory transducer  55.59 
 
 
551 aa  321  3e-86  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3998  methyl-accepting chemotaxis sensory transducer  55.59 
 
 
550 aa  320  3e-86  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3897  methyl-accepting chemotaxis sensory transducer  55.27 
 
 
551 aa  319  9e-86  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.198365  n/a   
 
 
-
 
NC_008576  Mmc1_3308  methyl-accepting chemotaxis sensory transducer  54.07 
 
 
682 aa  317  4e-85  Magnetococcus sp. MC-1  Bacteria  normal  0.785168  normal 
 
 
-
 
NC_011145  AnaeK_2401  methyl-accepting chemotaxis sensory transducer  39.26 
 
 
528 aa  316  8e-85  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  53.8 
 
 
676 aa  315  9e-85  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_011145  AnaeK_1691  methyl-accepting chemotaxis sensory transducer  40.99 
 
 
553 aa  314  1.9999999999999998e-84  Anaeromyxobacter sp. K  Bacteria  normal  0.302444  n/a   
 
 
-
 
NC_008751  Dvul_2361  methyl-accepting chemotaxis sensory transducer  52.62 
 
 
652 aa  314  1.9999999999999998e-84  Desulfovibrio vulgaris DP4  Bacteria  normal  0.128072  normal  0.188082 
 
 
-
 
NC_011891  A2cp1_1762  methyl-accepting chemotaxis sensory transducer  40.8 
 
 
553 aa  312  7.999999999999999e-84  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2187  methyl-accepting chemotaxis sensory transducer  40.57 
 
 
553 aa  312  1e-83  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3761  methyl-accepting chemotaxis sensory transducer  51.86 
 
 
557 aa  312  1e-83  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3837  methyl-accepting chemotaxis sensory transducer  40.37 
 
 
561 aa  311  2e-83  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.834659 
 
 
-
 
NC_011891  A2cp1_3844  methyl-accepting chemotaxis sensory transducer  53.21 
 
 
556 aa  310  5.9999999999999995e-83  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3704  methyl-accepting chemotaxis sensory transducer  52.08 
 
 
559 aa  308  1.0000000000000001e-82  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.183593  n/a   
 
 
-
 
NC_009483  Gura_2779  methyl-accepting chemotaxis sensory transducer  40.73 
 
 
566 aa  308  1.0000000000000001e-82  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0683  methyl-accepting chemotaxis protein, putative  42.32 
 
 
568 aa  308  2.0000000000000002e-82  Geobacter sulfurreducens PCA  Bacteria  normal  0.268569  n/a   
 
 
-
 
NC_011145  AnaeK_3602  methyl-accepting chemotaxis sensory transducer  41.28 
 
 
509 aa  308  2.0000000000000002e-82  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  37.41 
 
 
621 aa  305  1.0000000000000001e-81  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  37.86 
 
 
617 aa  305  1.0000000000000001e-81  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_010524  Lcho_1531  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  57.93 
 
 
1019 aa  303  4.0000000000000003e-81  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.301691 
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  53.25 
 
 
597 aa  303  4.0000000000000003e-81  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_010524  Lcho_1530  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  57.48 
 
 
890 aa  301  1e-80  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.155082 
 
 
-
 
NC_007760  Adeh_3513  methyl-accepting chemotaxis sensory transducer  40.43 
 
 
509 aa  299  8e-80  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.150611  n/a   
 
 
-
 
NC_002939  GSU1298  methyl-accepting chemotaxis protein  40.86 
 
 
568 aa  298  1e-79  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_04751  chemotaxis protein  60.84 
 
 
698 aa  298  1e-79  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1322  methyl-accepting chemotaxis sensory transducer  55.84 
 
 
538 aa  298  1e-79  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1220  methyl-accepting chemotaxis sensory transducer  55.19 
 
 
538 aa  298  1e-79  Anaeromyxobacter sp. K  Bacteria  normal  0.307637  n/a   
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  37.93 
 
 
608 aa  293  6e-78  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_011891  A2cp1_2489  methyl-accepting chemotaxis sensory transducer  39.02 
 
 
529 aa  293  7e-78  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  50 
 
 
581 aa  292  1e-77  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  53.46 
 
 
1500 aa  291  2e-77  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2874  methyl-accepting chemotaxis sensory transducer  53.33 
 
 
563 aa  290  3e-77  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.872696  normal  0.485865 
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  54.06 
 
 
566 aa  290  4e-77  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0949  methyl-accepting chemotaxis sensory transducer  58.11 
 
 
554 aa  289  7e-77  Geobacter sp. M21  Bacteria  n/a    normal  0.0219131 
 
 
-
 
NC_011769  DvMF_0621  methyl-accepting chemotaxis sensory transducer  46.67 
 
 
727 aa  289  9e-77  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0173671 
 
 
-
 
NC_012918  GM21_1105  methyl-accepting chemotaxis sensory transducer  40.33 
 
 
563 aa  288  1e-76  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008576  Mmc1_2401  methyl-accepting chemotaxis sensory transducer  49.37 
 
 
674 aa  288  2e-76  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000495749  normal  0.0928318 
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  57.97 
 
 
969 aa  286  5e-76  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1627  methyl-accepting chemotaxis sensory transducer  57.71 
 
 
733 aa  285  1.0000000000000001e-75  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.426202  n/a   
 
 
-
 
NC_008576  Mmc1_0628  methyl-accepting chemotaxis sensory transducer  39.76 
 
 
675 aa  285  1.0000000000000001e-75  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1300  methyl-accepting chemotaxis protein  41.49 
 
 
563 aa  283  4.0000000000000003e-75  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2989  methyl-accepting chemotaxis sensory transducer  58.47 
 
 
1093 aa  283  5.000000000000001e-75  Geobacter uraniireducens Rf4  Bacteria  normal  0.653084  n/a   
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  56.63 
 
 
686 aa  283  5.000000000000001e-75  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_007519  Dde_1077  methyl-accepting chemotaxis sensory transducer  55.41 
 
 
690 aa  282  9e-75  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.317064  n/a   
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  56 
 
 
494 aa  282  1e-74  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2944  methyl-accepting chemotaxis sensory transducer  52.69 
 
 
780 aa  282  1e-74  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0112  methyl-accepting chemotaxis sensory transducer  35.63 
 
 
556 aa  281  2e-74  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1366  methyl-accepting chemotaxis sensory transducer with Cache sensor  58.48 
 
 
1088 aa  281  2e-74  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000517956 
 
 
-
 
NC_011146  Gbem_3298  methyl-accepting chemotaxis sensory transducer  47.95 
 
 
553 aa  281  2e-74  Geobacter bemidjiensis Bem  Bacteria  normal  0.62981  n/a   
 
 
-
 
NC_007643  Rru_A1401  chemotaxis sensory transducer  38.42 
 
 
569 aa  281  3e-74  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2945  methyl-accepting chemotaxis sensory transducer  52.1 
 
 
780 aa  279  7e-74  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2847  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  59.14 
 
 
1089 aa  279  9e-74  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000851175  n/a   
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  59.04 
 
 
962 aa  278  2e-73  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_5777  methyl-accepting chemotaxis sensory transducer  47.06 
 
 
705 aa  278  2e-73  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.807181  normal  0.137814 
 
 
-
 
NC_008751  Dvul_1207  methyl-accepting chemotaxis sensory transducer  52.69 
 
 
720 aa  278  2e-73  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.149931 
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  54.82 
 
 
868 aa  277  3e-73  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6735  methyl-accepting chemotaxis receptor (MCP)  39.53 
 
 
566 aa  277  3e-73  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0787905  normal 
 
 
-
 
NC_012850  Rleg_3561  methyl-accepting chemotaxis sensory transducer  39.02 
 
 
569 aa  277  4e-73  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.216373 
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  56.99 
 
 
823 aa  276  8e-73  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3443  methyl-accepting chemotaxis sensory transducer  37.88 
 
 
553 aa  276  9e-73  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0628443 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  36 
 
 
559 aa  276  9e-73  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3708  methyl accepting chemotaxis protein  38.51 
 
 
553 aa  273  4.0000000000000004e-72  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3297  methyl-accepting chemotaxis sensory transducer  51.31 
 
 
548 aa  274  4.0000000000000004e-72  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1280  methyl-accepting chemotaxis sensory transducer  55.33 
 
 
1048 aa  273  4.0000000000000004e-72  Geobacter sp. M21  Bacteria  n/a    normal  0.0818053 
 
 
-
 
NC_012918  GM21_0950  methyl-accepting chemotaxis sensory transducer  52.57 
 
 
546 aa  274  4.0000000000000004e-72  Geobacter sp. M21  Bacteria  n/a    normal  0.187483 
 
 
-
 
NC_011369  Rleg2_3262  methyl-accepting chemotaxis sensory transducer  39.13 
 
 
569 aa  273  6e-72  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.846629 
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  52.44 
 
 
735 aa  273  7e-72  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2942  methyl-accepting chemotaxis sensory transducer  57.19 
 
 
1049 aa  273  7e-72  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1191  methyl-accepting chemotaxis sensory transducer  53.44 
 
 
846 aa  273  8.000000000000001e-72  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1532  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.94 
 
 
853 aa  271  2.9999999999999997e-71  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.103077 
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  54.1 
 
 
727 aa  270  4e-71  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  52.12 
 
 
735 aa  270  7e-71  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1108  methyl-accepting chemotaxis sensory transducer  56.63 
 
 
685 aa  270  7e-71  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009429  Rsph17025_3251  hypothetical protein  49.01 
 
 
552 aa  269  1e-70  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.367816  normal  0.217501 
 
 
-
 
NC_010338  Caul_0614  methyl-accepting chemotaxis sensory transducer  37.16 
 
 
560 aa  268  2e-70  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009431  Rsph17025_4246  hypothetical protein  35.83 
 
 
562 aa  266  8.999999999999999e-70  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.2464  normal  0.120296 
 
 
-
 
NC_007517  Gmet_2422  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.92 
 
 
1046 aa  265  1e-69  Geobacter metallireducens GS-15  Bacteria  normal  0.925436  normal 
 
 
-
 
NC_008752  Aave_4495  methyl-accepting chemotaxis sensory transducer  34.1 
 
 
605 aa  266  1e-69  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0928828 
 
 
-
 
NC_013421  Pecwa_0106  methyl-accepting chemotaxis sensory transducer  33.91 
 
 
556 aa  264  2e-69  Pectobacterium wasabiae WPP163  Bacteria  normal  0.405526  n/a   
 
 
-
 
NC_011989  Avi_4314  methyl-accepting chemotaxis protein  36.9 
 
 
564 aa  264  3e-69  Agrobacterium vitis S4  Bacteria  normal  0.77703  n/a   
 
 
-
 
NC_012918  GM21_2421  methyl-accepting chemotaxis sensory transducer  57.55 
 
 
816 aa  263  4.999999999999999e-69  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009050  Rsph17029_3810  methyl-accepting chemotaxis sensory transducer  37.06 
 
 
561 aa  263  4.999999999999999e-69  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.296432 
 
 
-
 
NC_009943  Dole_0872  methyl-accepting chemotaxis sensory transducer  51.92 
 
 
685 aa  262  1e-68  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
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