More than 300 homologs were found in PanDaTox collection
for query gene Rmet_5141 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007348  Reut_B3603  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  75.97 
 
 
411 aa  650    Ralstonia eutropha JMP134  Bacteria  normal  0.0376418  n/a   
 
 
-
 
NC_007974  Rmet_5141  acyl-CoA dehydrogenase  100 
 
 
412 aa  844    Cupriavidus metallidurans CH34  Bacteria  normal  0.337451  normal  0.365814 
 
 
-
 
NC_010338  Caul_3392  acyl-CoA dehydrogenase domain-containing protein  62.86 
 
 
403 aa  528  1e-149  Caulobacter sp. K31  Bacteria  normal  normal  0.160573 
 
 
-
 
NC_009719  Plav_1065  acyl-CoA dehydrogenase domain-containing protein  54.61 
 
 
402 aa  459  9.999999999999999e-129  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1361  acyl-CoA dehydrogenase domain-containing protein  51.21 
 
 
400 aa  412  1e-114  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0496  acyl-CoA dehydrogenase domain-containing protein  48.79 
 
 
400 aa  403  1e-111  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.954912  normal 
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  50.72 
 
 
398 aa  394  1e-108  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  50.24 
 
 
398 aa  388  1e-107  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  50.24 
 
 
398 aa  388  1e-107  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  50.24 
 
 
398 aa  388  1e-107  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  50.24 
 
 
398 aa  388  1e-107  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  50.24 
 
 
398 aa  388  1e-107  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  50 
 
 
398 aa  385  1e-106  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2018  acyl-CoA dehydrogenase domain-containing protein  46.9 
 
 
411 aa  382  1e-105  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.642987 
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  49.39 
 
 
398 aa  379  1e-104  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_009719  Plav_0499  acyl-CoA dehydrogenase domain-containing protein  48.44 
 
 
452 aa  379  1e-104  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.504662  normal 
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  49.15 
 
 
398 aa  378  1e-103  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  49.15 
 
 
398 aa  377  1e-103  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0944  acyl-CoA dehydrogenase-like protein  48.43 
 
 
400 aa  378  1e-103  Cupriavidus metallidurans CH34  Bacteria  normal  0.671788  normal 
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  49.15 
 
 
398 aa  377  1e-103  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  49.15 
 
 
398 aa  376  1e-103  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  49.15 
 
 
398 aa  377  1e-103  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2045  putative acyl-CoA dehydrogenase oxidoreductase protein  47.56 
 
 
398 aa  372  1e-102  Ralstonia solanacearum GMI1000  Bacteria  normal  0.257916  normal  0.141872 
 
 
-
 
NC_007347  Reut_A0978  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  48.18 
 
 
400 aa  375  1e-102  Ralstonia eutropha JMP134  Bacteria  normal  0.915118  n/a   
 
 
-
 
NC_007958  RPD_4007  acyl-CoA dehydrogenase-like  47.46 
 
 
398 aa  374  1e-102  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1104  acyl-CoA dehydrogenase-like protein  47.94 
 
 
397 aa  372  1e-102  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.289526  normal 
 
 
-
 
NC_007778  RPB_1238  Acyl-CoA dehydrogenase-like  46.97 
 
 
398 aa  370  1e-101  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1429  acyl-CoA dehydrogenase domain protein  46.73 
 
 
398 aa  370  1e-101  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  47.22 
 
 
399 aa  369  1e-101  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_010682  Rpic_2197  acyl-CoA dehydrogenase domain protein  46.1 
 
 
398 aa  365  1e-100  Ralstonia pickettii 12J  Bacteria  normal  normal  0.34264 
 
 
-
 
NC_011894  Mnod_5441  pimeloyl-CoA dehydrogenase, large subunit  47.13 
 
 
402 aa  368  1e-100  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.504048  n/a   
 
 
-
 
NC_007951  Bxe_A1390  putative acyl-CoA dehydrogenase  46.3 
 
 
416 aa  367  1e-100  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.342556 
 
 
-
 
NC_012856  Rpic12D_1874  acyl-CoA dehydrogenase domain protein  46.34 
 
 
398 aa  365  1e-100  Ralstonia pickettii 12D  Bacteria  normal  normal  0.400233 
 
 
-
 
NC_010681  Bphyt_2737  acyl-CoA dehydrogenase domain protein  45.82 
 
 
402 aa  365  1e-100  Burkholderia phytofirmans PsJN  Bacteria  normal  0.944571  normal 
 
 
-
 
NC_010622  Bphy_1992  acyl-CoA dehydrogenase domain-containing protein  47.22 
 
 
398 aa  365  1e-100  Burkholderia phymatum STM815  Bacteria  normal  0.11361  normal  0.377898 
 
 
-
 
NC_008752  Aave_4313  acyl-CoA dehydrogenase domain-containing protein  46.28 
 
 
402 aa  365  1e-100  Acidovorax citrulli AAC00-1  Bacteria  normal  0.168466  normal  0.322728 
 
 
-
 
NC_008726  Mvan_1965  acyl-CoA dehydrogenase domain-containing protein  47.97 
 
 
410 aa  363  3e-99  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.180628  normal 
 
 
-
 
NC_010511  M446_0233  pimeloyl-CoA dehydrogenase, large subunit  46.89 
 
 
400 aa  362  5.0000000000000005e-99  Methylobacterium sp. 4-46  Bacteria  normal  0.172287  normal  0.0105147 
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  46.97 
 
 
398 aa  362  7.0000000000000005e-99  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_010338  Caul_2048  acyl-CoA dehydrogenase domain-containing protein  45.89 
 
 
404 aa  361  1e-98  Caulobacter sp. K31  Bacteria  normal  0.200153  normal 
 
 
-
 
NC_009338  Mflv_4379  acyl-CoA dehydrogenase domain-containing protein  48.21 
 
 
410 aa  361  1e-98  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.770701  normal 
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  46.73 
 
 
398 aa  361  1e-98  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3780  acyl-CoA dehydrogenase domain-containing protein  49.51 
 
 
374 aa  360  2e-98  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_2702  acyl-CoA dehydrogenase domain protein  46.86 
 
 
402 aa  360  2e-98  Haliangium ochraceum DSM 14365  Bacteria  normal  0.428781  normal  0.37064 
 
 
-
 
NC_010084  Bmul_1045  acyl-CoA dehydrogenase domain-containing protein  48.91 
 
 
398 aa  359  4e-98  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0868009  normal  0.228879 
 
 
-
 
NC_009719  Plav_1060  acyl-CoA dehydrogenase domain-containing protein  46.25 
 
 
397 aa  358  6e-98  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.596056  normal 
 
 
-
 
NC_011992  Dtpsy_3018  acyl-CoA dehydrogenase domain protein  44.79 
 
 
403 aa  359  6e-98  Acidovorax ebreus TPSY  Bacteria  normal  0.162676  n/a   
 
 
-
 
NC_008782  Ajs_3737  acyl-CoA dehydrogenase domain-containing protein  44.79 
 
 
403 aa  358  7e-98  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1724  acyl-CoA dehydrogenase domain-containing protein  48.46 
 
 
410 aa  358  8e-98  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1743  acyl-CoA dehydrogenase-like protein  48.22 
 
 
410 aa  357  2.9999999999999997e-97  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1790  acyl-CoA dehydrogenase domain-containing protein  48.22 
 
 
410 aa  357  2.9999999999999997e-97  Mycobacterium sp. KMS  Bacteria  normal  0.340582  normal 
 
 
-
 
NC_007510  Bcep18194_A6220  Acyl-CoA dehydrogenase  46.54 
 
 
402 aa  355  5.999999999999999e-97  Burkholderia sp. 383  Bacteria  decreased coverage  0.0082466  normal 
 
 
-
 
NC_012791  Vapar_0842  acyl-CoA dehydrogenase domain protein  44.6 
 
 
402 aa  355  5.999999999999999e-97  Variovorax paradoxus S110  Bacteria  normal  0.0566206  n/a   
 
 
-
 
NC_008060  Bcen_2264  acyl-CoA dehydrogenase-like  45.71 
 
 
402 aa  355  6.999999999999999e-97  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0525732  n/a   
 
 
-
 
NC_010508  Bcenmc03_2889  acyl-CoA dehydrogenase domain-containing protein  45.95 
 
 
402 aa  355  6.999999999999999e-97  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.222228  normal 
 
 
-
 
NC_008542  Bcen2424_2878  acyl-CoA dehydrogenase domain-containing protein  45.71 
 
 
402 aa  355  6.999999999999999e-97  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6856  acyl-CoA dehydrogenase domain-containing protein  45.08 
 
 
402 aa  355  1e-96  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1395  acyl-CoA dehydrogenase domain-containing protein  45.11 
 
 
398 aa  354  2e-96  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_4958  acyl-CoA dehydrogenase domain-containing protein  45.63 
 
 
397 aa  348  1e-94  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_0635  acyl-CoA dehydrogenase domain-containing protein  46.54 
 
 
402 aa  347  2e-94  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009427  Saro_3557  acyl-CoA dehydrogenase domain-containing protein  45.95 
 
 
404 aa  347  2e-94  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.255939  n/a   
 
 
-
 
NC_008390  Bamb_2933  acyl-CoA dehydrogenase domain-containing protein  45.24 
 
 
398 aa  347  2e-94  Burkholderia ambifaria AMMD  Bacteria  normal  0.26502  n/a   
 
 
-
 
NC_007908  Rfer_2593  acyl-CoA dehydrogenase-like  43.54 
 
 
402 aa  347  3e-94  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2810  acyl-CoA dehydrogenase domain-containing protein  46.3 
 
 
402 aa  345  1e-93  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0471  acyl-CoA dehydrogenase domain-containing protein  46.3 
 
 
402 aa  345  1e-93  Burkholderia pseudomallei 1106a  Bacteria  normal  0.367383  n/a   
 
 
-
 
NC_009074  BURPS668_0451  acyl-CoA dehydrogenase domain-containing protein  46.3 
 
 
402 aa  345  1e-93  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1383  acyl-CoA dehydrogenase domain-containing protein  46.3 
 
 
402 aa  345  1e-93  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0209  acyl-CoA dehydrogenase domain-containing protein  46.3 
 
 
402 aa  345  1e-93  Burkholderia mallei SAVP1  Bacteria  normal  0.150143  n/a   
 
 
-
 
NC_010002  Daci_5374  acyl-CoA dehydrogenase domain-containing protein  45.5 
 
 
393 aa  344  2e-93  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.988839 
 
 
-
 
NC_010551  BamMC406_2795  acyl-CoA dehydrogenase domain-containing protein  44.63 
 
 
398 aa  343  4e-93  Burkholderia ambifaria MC40-6  Bacteria  normal  0.174567  normal 
 
 
-
 
NC_008228  Patl_0105  acyl-CoA dehydrogenase-like  44.07 
 
 
396 aa  342  9e-93  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3439  acyl-CoA dehydrogenase domain-containing protein  46.04 
 
 
401 aa  340  2e-92  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.154359 
 
 
-
 
NC_012791  Vapar_1274  acyl-CoA dehydrogenase domain protein  44.69 
 
 
393 aa  340  2.9999999999999998e-92  Variovorax paradoxus S110  Bacteria  normal  0.409233  n/a   
 
 
-
 
NC_007651  BTH_I0394  acyl-CoA dehydrogenase domain-containing protein  45.71 
 
 
403 aa  340  4e-92  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2731  acyl-CoA dehydrogenase domain protein  45.74 
 
 
393 aa  339  5.9999999999999996e-92  Acidovorax ebreus TPSY  Bacteria  normal  0.572284  n/a   
 
 
-
 
NC_007802  Jann_1503  acyl-CoA dehydrogenase-like  44.42 
 
 
393 aa  338  9.999999999999999e-92  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0425  acyl-CoA dehydrogenase domain-containing protein  46.54 
 
 
400 aa  338  9.999999999999999e-92  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.735968  normal  0.979961 
 
 
-
 
NC_008782  Ajs_3393  acyl-CoA dehydrogenase domain-containing protein  45.74 
 
 
393 aa  337  1.9999999999999998e-91  Acidovorax sp. JS42  Bacteria  normal  normal  0.389251 
 
 
-
 
NC_014158  Tpau_1806  acyl-CoA dehydrogenase domain protein  44.91 
 
 
410 aa  336  5e-91  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.445924  n/a   
 
 
-
 
NC_009511  Swit_0317  acyl-CoA dehydrogenase domain-containing protein  45.43 
 
 
386 aa  336  5e-91  Sphingomonas wittichii RW1  Bacteria  normal  0.410084  normal 
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  42.65 
 
 
396 aa  333  3e-90  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
NC_007948  Bpro_3845  acyl-CoA dehydrogenase-like  43.8 
 
 
393 aa  333  3e-90  Polaromonas sp. JS666  Bacteria  normal  0.634206  normal 
 
 
-
 
NC_008347  Mmar10_2529  acyl-CoA dehydrogenase domain-containing protein  44.93 
 
 
393 aa  333  3e-90  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  43.13 
 
 
396 aa  333  4e-90  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7146  Acyl-CoA dehydrogenase-like  43.07 
 
 
398 aa  332  6e-90  Burkholderia sp. 383  Bacteria  normal  0.333486  normal 
 
 
-
 
NC_009484  Acry_0253  acyl-CoA dehydrogenase domain-containing protein  43.37 
 
 
403 aa  330  3e-89  Acidiphilium cryptum JF-5  Bacteria  normal  0.0424769  n/a   
 
 
-
 
NC_007973  Rmet_0845  acyl-CoA dehydrogenase-like protein  43.31 
 
 
398 aa  330  4e-89  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.444844 
 
 
-
 
NC_009485  BBta_5149  putative acyl-CoA dehydrogenase  44.02 
 
 
393 aa  329  5.0000000000000004e-89  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.195919  normal  0.0612186 
 
 
-
 
NC_007958  RPD_3550  acyl-CoA dehydrogenase-like  42.41 
 
 
396 aa  327  2.0000000000000001e-88  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3535  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  42.72 
 
 
397 aa  327  3e-88  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2104  acyl-CoA dehydrogenase domain-containing protein  44.53 
 
 
393 aa  327  3e-88  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1646  acyl-CoA dehydrogenase-like  42.82 
 
 
393 aa  327  3e-88  Rhodoferax ferrireducens T118  Bacteria  normal  0.765479  n/a   
 
 
-
 
NC_008781  Pnap_3224  acyl-CoA dehydrogenase domain-containing protein  43.07 
 
 
393 aa  327  3e-88  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1240  acyl-CoA dehydrogenase domain-containing protein  44.53 
 
 
379 aa  325  8.000000000000001e-88  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.276954 
 
 
-
 
NC_013441  Gbro_3358  acyl-CoA dehydrogenase domain protein  44.87 
 
 
410 aa  325  8.000000000000001e-88  Gordonia bronchialis DSM 43247  Bacteria  normal  0.72222  n/a   
 
 
-
 
NC_007925  RPC_2229  acyl-CoA dehydrogenase-like  42.89 
 
 
396 aa  325  9e-88  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.033637  normal  0.0664218 
 
 
-
 
NC_010505  Mrad2831_1060  acyl-CoA dehydrogenase domain-containing protein  42.79 
 
 
398 aa  321  9.999999999999999e-87  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6851  acyl-CoA dehydrogenase domain-containing protein  43.03 
 
 
399 aa  320  1.9999999999999998e-86  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3803  putative acyl-CoA dehydrogenase-like protein  42.82 
 
 
397 aa  320  1.9999999999999998e-86  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7071  putative pimeloyl-CoA dehydrogenase pimC (large subunit)  41.69 
 
 
396 aa  314  1.9999999999999998e-84  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
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