33 homologs were found in PanDaTox collection
for query gene Ndas_4988 on replicon NC_014211
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_014211  Ndas_4988  transcriptional regulator, LuxR family  100 
 
 		 118 aa  236  1e-61  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2880  regulatory protein, LuxR  60 
 
 		 127 aa  120  4e-27  Thermobifida fusca YX  Bacteria  normal  0.0642164  n/a   
 
 
-
 
NC_013510  Tcur_4481  transcriptional regulator, LuxR family  77.05 
 
 		 76 aa  77.4  0.00000000000006  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_3421  LuxR family transcriptional regulator  53.97 
 
 		 82 aa  71.2  0.000000000005  Thermobispora bispora DSM 43833  Bacteria  normal  0.864452  normal  1 
 
 
-
 
NC_013595  Sros_5791  transcriptional regulator protein-like protein  36.84 
 
 		 333 aa  47.8  0.00005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0418126  normal  0.0683499 
 
 
-
 
NC_007974  Rmet_4854  putative two component LuxR family transcriptional regulator  38.67 
 
 		 211 aa  47.4  0.00008  Cupriavidus metallidurans CH34  Bacteria  normal  0.133138  normal  0.31096 
 
 
-
 
NC_008254  Meso_2457  LuxR family transcriptional regulator  33.03 
 
 		 554 aa  46.2  0.0001  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009511  Swit_4199  regulatory protein, LuxR  31.13 
 
 		 855 aa  46.2  0.0002  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.142655 
 
 
-
 
NC_013131  Caci_7639  transcriptional regulator, LuxR family  43.55 
 
 		 314 aa  45.4  0.0002  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_0719  transcriptional regulator, LuxR family  38.33 
 
 		 768 aa  43.9  0.0007  Meiothermus silvanus DSM 9946  Bacteria  normal  0.141698  hitchhiker  0.00663122 
 
 
-
 
NC_013159  Svir_32970  predicted transcriptional regulator  40.32 
 
 		 321 aa  43.9  0.0007  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  35.29 
 
 		 234 aa  43.1  0.001  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_010676  Bphyt_5099  ATP-dependent transcriptional regulator, MalT-like, LuxR family  33.8 
 
 		 900 aa  43.1  0.001  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_5682  transcriptional regulator, LuxR family  37.33 
 
 		 341 aa  42.7  0.002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.362244  normal  0.868486 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  36.07 
 
 		 237 aa  42  0.003  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_013947  Snas_4680  transcriptional regulator, LuxR family  37.84 
 
 		 107 aa  42  0.003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.141979  normal  0.0546255 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  29.91 
 
 		 221 aa  41.6  0.003  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  36.07 
 
 		 237 aa  42  0.003  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_009523  RoseRS_0474  response regulator receiver protein  37.1 
 
 		 471 aa  42  0.003  Roseiflexus sp. RS-1  Bacteria  normal  0.40168  normal  0.0487434 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  40.98 
 
 		 228 aa  42  0.003  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  36 
 
 		 225 aa  41.6  0.004  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_009767  Rcas_0145  LuxR family transcriptional regulator  35.48 
 
 		 454 aa  41.2  0.004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_4346  helix-turn-helix, type 11 domain-containing protein  45.1 
 
 		 330 aa  41.6  0.004  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_3766  response regulator receiver protein  37.5 
 
 		 539 aa  40.8  0.006  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.484632  normal  0.834357 
 
 
-
 
NC_013173  Dbac_2905  transcriptional regulator, LuxR family  36 
 
 		 335 aa  40.8  0.007  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  33.87 
 
 		 303 aa  40.8  0.007  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  36.21 
 
 		 224 aa  40.4  0.008  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_007974  Rmet_4986  two component LuxR family transcriptional regulator  41.79 
 
 		 237 aa  40.4  0.008  Cupriavidus metallidurans CH34  Bacteria  normal  0.170484  normal  0.313407 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  37.88 
 
 		 250 aa  40.4  0.009  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  36.07 
 
 		 234 aa  40.4  0.009  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  37.88 
 
 		 238 aa  40.4  0.009  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  33.33 
 
 		 227 aa  40.4  0.009  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_1971  two component LuxR family transcriptional regulator  38.1 
 
 		 216 aa  40.4  0.009  Frankia sp. EAN1pec  Bacteria  normal  0.356635  normal  0.773651 
 
 
-
 
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