| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2880 |
|---|
| Symbol | |
|---|
| ID | 3581785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 3393920 |
|---|
| End bp | 3394303 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637686609 |
|---|
| Product | regulatory protein, LuxR |
|---|
| Protein accession | YP_290936 |
|---|
| Protein GI | 72163279 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.0642164 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGTCT TCGCGGTGAT GGAGTCGTTG TTCCGCACTC ACCGGACGGA TGAGGAGGAC
GGAGTGGAAC AGGCCACACT CGTACGTCAG ACAACCGCTA AAGAAGAACT GAACGGACCG
GTCCTGCGCG ACTGCTGCCT GGTGCCCGCC CAAGGGCGTG AACGCGACTC GAACGAGGAG
TACGCCCGGG CCGTGGGCCT CAACGAAGAC GAGCTGCGCA TGCTGGCCGA AATCGCCACC
GGCGTCACCA CCGACGTGGT GGCGCGTCGC CTGGACCTCA GCGCGCGCAC CCTGCGCCGC
CGCCTCCGCT CGATCTGCGA CCGTCTTGGC GTCAACACCC CCATCGAAGC GGTCGTCTGG
GCCGCCCGCC GGCACCTGAT CTAG
|
|---|
| Protein sequence | MCVFAVMESL FRTHRTDEED GVEQATLVRQ TTAKEELNGP VLRDCCLVPA QGRERDSNEE
YARAVGLNED ELRMLAEIAT GVTTDVVARR LDLSARTLRR RLRSICDRLG VNTPIEAVVW
AARRHLI
|
|---|
| |