Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4680 |
Symbol | |
ID | 8885886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 4991356 |
End bp | 4991679 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003513416 |
Protein GI | 291302138 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.141979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0546255 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGACA AGCCTTCCAA GGGTCTCGAC ATCGGGCCCT TGCATGAAGT GCGACGACAG CAGACCTGCG GAGCGTGTCC ATACAACACG GTCAACCCCC ACGCTCCCCG ACCGGCGCTA ACGTCACGAC AGCTTTGCGT GCTTTCGGCT ATCGCGAACG ACTGGACGGA CAAACGTATC GCCAAACTTC TGCAGCTGAG CGATCGTCAG GTCCGACGCG AGATCTCGCG CATGTGCGAG ATCCTTGGGG TTTCCAGCCG GATCCAGTTG GTCGCCATCG CACTGCGCCT CGGCATCCTG CCGTGGTCCG CCTTGGGGTG CTGA
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Protein sequence | MADKPSKGLD IGPLHEVRRQ QTCGACPYNT VNPHAPRPAL TSRQLCVLSA IANDWTDKRI AKLLQLSDRQ VRREISRMCE ILGVSSRIQL VAIALRLGIL PWSALGC
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