Gene Snas_4680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4680 
Symbol 
ID8885886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4991356 
End bp4991679 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content62% 
IMG OID 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003513416 
Protein GI291302138 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.141979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0546255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACA AGCCTTCCAA GGGTCTCGAC ATCGGGCCCT TGCATGAAGT GCGACGACAG 
CAGACCTGCG GAGCGTGTCC ATACAACACG GTCAACCCCC ACGCTCCCCG ACCGGCGCTA
ACGTCACGAC AGCTTTGCGT GCTTTCGGCT ATCGCGAACG ACTGGACGGA CAAACGTATC
GCCAAACTTC TGCAGCTGAG CGATCGTCAG GTCCGACGCG AGATCTCGCG CATGTGCGAG
ATCCTTGGGG TTTCCAGCCG GATCCAGTTG GTCGCCATCG CACTGCGCCT CGGCATCCTG
CCGTGGTCCG CCTTGGGGTG CTGA
 
Protein sequence
MADKPSKGLD IGPLHEVRRQ QTCGACPYNT VNPHAPRPAL TSRQLCVLSA IANDWTDKRI 
AKLLQLSDRQ VRREISRMCE ILGVSSRIQL VAIALRLGIL PWSALGC