31 homologs were found in PanDaTox collection
for query gene Mvan_1396 on replicon NC_008726
Organism: Mycobacterium vanbaalenii PYR-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008726  Mvan_1396  TetR family transcriptional regulator  100 
 
 
247 aa  496  1e-139  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4010  TetR family transcriptional regulator  59.22 
 
 
228 aa  238  5e-62  Mycobacterium sp. JLS  Bacteria  hitchhiker  0.00413509  normal 
 
 
-
 
NC_009565  TBFG_11243  transcriptional regulator  57.84 
 
 
212 aa  235  6e-61  Mycobacterium tuberculosis F11  Bacteria  normal  0.0445311  normal  0.0334035 
 
 
-
 
NC_008705  Mkms_4070  TetR family transcriptional regulator  57.07 
 
 
228 aa  232  4.0000000000000004e-60  Mycobacterium sp. KMS  Bacteria  normal  0.120429  normal 
 
 
-
 
NC_008146  Mmcs_3996  TetR family transcriptional regulator  57.07 
 
 
228 aa  232  4.0000000000000004e-60  Mycobacterium sp. MCS  Bacteria  normal  0.624951  n/a   
 
 
-
 
NC_008726  Mvan_4498  TetR family transcriptional regulator  56.54 
 
 
220 aa  219  3e-56  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.1303  normal  0.37719 
 
 
-
 
NC_009338  Mflv_2198  TetR family transcriptional regulator  56.02 
 
 
218 aa  214  9.999999999999999e-55  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3673  transcriptional regulator, TetR family  43.01 
 
 
230 aa  147  2.0000000000000003e-34  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3548  transcriptional regulator, TetR family  39.38 
 
 
224 aa  138  6e-32  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0228014 
 
 
-
 
NC_013530  Xcel_0144  transcriptional regulator, TetR family  35.75 
 
 
233 aa  119  3.9999999999999996e-26  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_16540  transcriptional regulator, tetR family  34.36 
 
 
219 aa  114  1.0000000000000001e-24  Brachybacterium faecium DSM 4810  Bacteria  normal  0.481264  n/a   
 
 
-
 
NC_012669  Bcav_0538  transcriptional regulator, TetR family  35.2 
 
 
254 aa  111  1.0000000000000001e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_1758  transcriptional regulator, TetR family  34.85 
 
 
232 aa  105  6e-22  Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.000730158  normal  0.179073 
 
 
-
 
NC_014165  Tbis_3200  TetR family transcriptional regulator  40.38 
 
 
237 aa  103  3e-21  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2967  regulatory protein, TetR  38.71 
 
 
205 aa  100  2e-20  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3756  transcriptional regulator, TetR family  31.96 
 
 
252 aa  99  6e-20  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_3188  TetR family transcriptional regulator  36.13 
 
 
211 aa  91.7  1e-17  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00490863 
 
 
-
 
NC_013595  Sros_3159  putative transcriptional regulator, TetR family  28.38 
 
 
221 aa  71.6  0.00000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.251281  normal 
 
 
-
 
NC_013947  Snas_5316  transcriptional regulator, TetR family  33.02 
 
 
215 aa  69.3  0.00000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.505659  normal 
 
 
-
 
NC_013131  Caci_3567  transcriptional regulator, TetR family  30.85 
 
 
214 aa  60.1  0.00000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_2617  transcriptional regulator, TetR family  30.72 
 
 
214 aa  50.8  0.00002  Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.0000000311719  normal  0.0685304 
 
 
-
 
NC_014210  Ndas_1906  transcriptional regulator, TetR family  34.38 
 
 
193 aa  49.7  0.00004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.812491 
 
 
-
 
NC_009338  Mflv_2369  TetR family transcriptional regulator  28.79 
 
 
202 aa  47.8  0.0002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1153  transcriptional regulator, TetR family  32.52 
 
 
246 aa  45.8  0.0006  Thauera sp. MZ1T  Bacteria  normal  0.181492  n/a   
 
 
-
 
NC_014210  Ndas_1682  transcriptional regulator, TetR family  26.44 
 
 
221 aa  45.8  0.0006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.274254 
 
 
-
 
NC_008554  Sfum_3090  TetR family transcriptional regulator  30.77 
 
 
218 aa  44.3  0.002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.595832  hitchhiker  0.000923351 
 
 
-
 
NC_011898  Ccel_2161  transcriptional regulator, TetR family  35.38 
 
 
204 aa  43.1  0.004  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1746  TetR family transcriptional regulator  27.1 
 
 
209 aa  43.1  0.004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.227148  normal  0.0202921 
 
 
-
 
NC_009664  Krad_2221  transcriptional regulator, TetR family  35.96 
 
 
264 aa  42.4  0.006  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.104647  normal 
 
 
-
 
NC_008340  Mlg_1458  TetR family transcriptional regulator  29.27 
 
 
209 aa  42.4  0.006  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.121951 
 
 
-
 
NC_010338  Caul_5065  TetR family transcriptional regulator  42.59 
 
 
202 aa  42  0.01  Caulobacter sp. K31  Bacteria  normal  0.174952  normal  0.51505 
 
 
-
 
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