Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5316 |
Symbol | |
ID | 8886525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5646820 |
End bp | 5647467 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003514043 |
Protein GI | 291302765 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.505659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG TCGATCCGCG AGACCTGACC GCCCGCGCCC GGATCCGGGA CGCGGCGCTG CGACATTTCG GTGAACAGGG CTTCGACCGG GCGACGATCC GCGGCATCGC CGAGATCGCC GGGGTCTCGT CCGGTCTGCT TCGCCATCAC TACGGCTCCA AGGAAGAGCT GCGCGACGCC TGCGACGCCT ACCTGGCCGA GACACTGGCC GAACTCAACG ACCGGGTTCG CGCGGCCGAC GCGTCAGACG GCGTCAACTA TGTGGCCGTC GCGGGCGCCG CGTTCGGTCC GTACCAGAAG TACCTGTCCC GGGCACTGGC CGAAGGCCGG GCGCAGCCGA TCTTCGACAA GATGGTCGAG CTCGGCGGCC AGTGGCTGGA GGAGATGGAC GCCAAGCGAT CCGATCCGCC GACCGTGTCA CGACAGGCCC GGGCAGCGGT GTCCACCGCG ATGTCGCTGT CGATCGGGAT CCTGCACTCG CACGTGTCGC GGCACCTCGG GATGGACGTG TTCAGTCCAC AGGGGGCCGA CGTGCTGGTG CGGGTGCTGC TCGACCTGTA CTCGCATCCG ATGCTCAGTC CCGACGAGGC GGCGGCCCAC TTGGCGCGTC TCGACGAGAC CGCGCGCCCC GGGGAGGAGG AACGATGA
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Protein sequence | MTDVDPRDLT ARARIRDAAL RHFGEQGFDR ATIRGIAEIA GVSSGLLRHH YGSKEELRDA CDAYLAETLA ELNDRVRAAD ASDGVNYVAV AGAAFGPYQK YLSRALAEGR AQPIFDKMVE LGGQWLEEMD AKRSDPPTVS RQARAAVSTA MSLSIGILHS HVSRHLGMDV FSPQGADVLV RVLLDLYSHP MLSPDEAAAH LARLDETARP GEEER
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