Gene Mmcs_3996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3996 
Symbol 
ID4112826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand+ 
Start bp4261486 
End bp4262172 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content68% 
IMG OID638033139 
ProductTetR family transcriptional regulator 
Protein accessionYP_641157 
Protein GI108800960 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.624951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTCAG CCGACGCCGA CCGGACCACC CTCGCCCGTA TCCGAGATGC GGCGATCGAG 
CAGTTCGGCC GGCACGGCTT CGGCGTCGGA GTGCGCACGA TCGCCGAATC CGCCGGGGTG 
AGCCCCGCGC TGGTGATCCA CCACTTCGGT TCCAAGGACG GCCTGCGCAA GGCCTGCGAC 
GAATACGTCG CCGAGGTGAT CCGCAGCGAC AAGTCGGCCT CGATCCAGAG CAACGATCCG 
GCGACCTGGC TGGCGCAGAT CGCCGAGATC GAGTCGTACG CCCCGCTGAT GGCCTACCTG 
GTGCGCAGCC TGCAGTCCGG CGGCGACCTG GCGCGGGCGT TCTGGCGGCG GATGATCGAC 
AACGTCGAGC AGTATCTCGA CGAGGGGGTC CGCGCGGGTA CGGTCAAACC CAGCCACGAC 
CCCCGAGGAC GGGCCCGCTT CCTGGCGATG GCCAGCGGCG GCGGCTTCCT GCTGTATCTG 
CAGATGCACG AGGACCCGAC CGACCTGCGC CGGGTCCTGC GCGACTACTC CGACGACATG 
GTCCTGCCCG CCCTCGAGAT CTACACCAAC GGGCTGATGG CCGATTCGAC GATGTACGAC 
GCCTTCCTGG CAAACCAGGG CGCCTCATCC ACACACCAAG GAGACGGTGA TGACGGTTCA 
GACGAGCAGG TCCCCGCGAC GGCCTGA
 
Protein sequence
MRSADADRTT LARIRDAAIE QFGRHGFGVG VRTIAESAGV SPALVIHHFG SKDGLRKACD 
EYVAEVIRSD KSASIQSNDP ATWLAQIAEI ESYAPLMAYL VRSLQSGGDL ARAFWRRMID 
NVEQYLDEGV RAGTVKPSHD PRGRARFLAM ASGGGFLLYL QMHEDPTDLR RVLRDYSDDM 
VLPALEIYTN GLMADSTMYD AFLANQGASS THQGDGDDGS DEQVPATA