Gene Sros_3159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3159 
Symbol 
ID8666447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3439426 
End bp3440091 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content70% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003338847 
Protein GI271964651 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.251281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGA CCACGACCGG ACCCGACCCC GAGGACCTCA CCGCGCGCGC CCGCATCAGG 
GACGCCGCGA TGCGGCACTT CGCCGAGCAG GGGTTCGAAC GGGCCACGAT CAGGGGTATC
GCCGAGACCG CCGGCGTGTC GTCAGGGCTG GTGCGCCACC ACTTCGGCTC CAAGCAGGCG
CTGCGGGAGG CGTGCGACGC GCACCTGACC AAGGTGATCC GCAGGCTCAA CGACGAGGTC
CGGTCGGGCC ACGCGCTCGA CAAGGCGAAC CCCGTCGCCA CCGCCAACAC CGTGATGGCC
CCCTACCAGG GATACCTGGC CCGCGCGCTG GCGGAGGGAT CGGCCGAGGC CGTGTTCGAC
CAGATGGTCG AGCTCACCGA GGAGTGGCTC GCGGACGCCG ACGAGAGGCG TCCCGACGTC
CCCGACGTCG ACAGGAAGGC CAGGGCGACG GTGAGAACCG CGATGGCGCT GGCCGTCGTG
ATCCTGCACA AGCATGTGTC CAGGGGCATG GGCGTCGATC TGTTCAGCCC CGAGGGAGAC
CTGCTGCTCG CCAGGACCCT CATCGACGTC TACTCGCATC CCATGCTCAG CACCGAGGAC
GCCGCCGAGG CCAGAGCCGC TCTCGACAGG CTCCGGCCCG AGCCGTCCGA GACAGGCCGG
GCCTGA
 
Protein sequence
MSVTTTGPDP EDLTARARIR DAAMRHFAEQ GFERATIRGI AETAGVSSGL VRHHFGSKQA 
LREACDAHLT KVIRRLNDEV RSGHALDKAN PVATANTVMA PYQGYLARAL AEGSAEAVFD
QMVELTEEWL ADADERRPDV PDVDRKARAT VRTAMALAVV ILHKHVSRGM GVDLFSPEGD
LLLARTLIDV YSHPMLSTED AAEARAALDR LRPEPSETGR A