Gene Bfae_16540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_16540 
Symbol 
ID8400200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand- 
Start bp1860106 
End bp1860765 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content74% 
IMG OID644997719 
Producttranscriptional regulator, tetR family 
Protein accessionYP_003155070 
Protein GI257068815 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.481264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCCGA CCCCTCCCGC CGATGAGCGG ATCCTCCGTG CCGCGCTGCA GCGCTTCGCC 
GTGGAGGGTC TGCGGGCCCC GCTGCGCGCC GTCGCCCAGG ACGCCGGCGT CAGCGCGGGC 
CTGATCATCC ACCACTACGG CTCCCGGGAG AAGCTGCTCG AGGCCTGCGA CAGGCGGGCG 
CTGCAGATCA CCCGGGAGAA CAAGCGAGAG GTGCTCACCG GCGGCTCTGC CGCGATGCTC 
GCCCAGCTCG CCGAGATCGC CCGCTTCGCC CCCGTCGTCG GGTACGTGCT GCGCCGGCTG 
CAGGCGGGCG GGCCGCTGGC GCAGCAGCTC GTGGGCGATT TCGTCGCCGA CGCCCTCGTC 
TACCTCGCCG AGGGAGAGGC GGCCGGCCTG ATCAGCACCA GCCGGGACCC CGAGGCCAGG 
GCCCGGGTGC TCACGGAGAT GGCGCTCGGC GCGCTGGTGC TCCAGATGCC CTCCCAGCGC 
GACCGGCTCG ACCTCGTCGG CCTGCCCACG TGGCTGCGCT CCTTCACCGA CTCCCTCGTC 
GCCCCGGTGC TCGAGCTCTA CACCACCCCG CTGCTCACCG ACGCCTCCCT GCTCGACGCC 
TATCTCGCCG CGGCACCGCC CGGCGACGCC ACCGCACCGA AGGATGGGAC CCCCTCATGA
 
Protein sequence
MEPTPPADER ILRAALQRFA VEGLRAPLRA VAQDAGVSAG LIIHHYGSRE KLLEACDRRA 
LQITRENKRE VLTGGSAAML AQLAEIARFA PVVGYVLRRL QAGGPLAQQL VGDFVADALV 
YLAEGEAAGL ISTSRDPEAR ARVLTEMALG ALVLQMPSQR DRLDLVGLPT WLRSFTDSLV 
APVLELYTTP LLTDASLLDA YLAAAPPGDA TAPKDGTPS