Gene Ndas_3673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3673 
Symbol 
ID9247542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4409427 
End bp4410119 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003681577 
Protein GI297562603 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTAAAG TATTGAACAT GAGTTCAACC GACCGTCCGG ACCGGCCCGA CGGGGAGTCC 
GACCTCACGG CGCGCGCCAG GATCCGCGAC GCGGCGATCG CGTGCTTCGG CCAGCGCGGG
TTCGGCGTGA GCGTGCGGGC GATCGCCGAG CAGGCCGGGG TCTCCCCCGG CCTGGTGATC
CACCACTTCG GCTCCAAGGA CAAGCTCCGG CGGGCCTGCG ACGACCACGT CACCGCGGCC
GTCAACGAGG TCAAGACGGA CACGGTCACC AGCCACGACG GGCAGACCTT CCTCCACCAG
CTCGCGACGA TGGAGCAGTA CGCCCCGCTG CTGGCCTACG TCGTCCGCTC CATGCAGGCC
GGGGGCCCGC TCGCGGCCGC GCTCTTCGAG CGCATGGTGG CCGACATCGA GGTCTACCTC
GCCGCGGGCG AGGCCGAGGG CACCATCCGC CCGAGCCGGG ACCCGGCCCG GCGCGCCCGC
TACCTGGCCG CCAACTCCCT CGGATCGCTG CTGCTGTTCC TCACGCTGGG GCGCTTCGGG
GAGGAGGTCG ACTTCGCCCG GGTCGCGCGC GAGTGGTCGC GGGAGTACAT GCTCCCGACC
CTGGAGCTGT ACACCGAGGG TCTGCTCACC GAGCGCACGA TCCTCGACGC CTACCTCCTG
TACGTCGGCG ATCCCCCCGA GGAGCCCCGC TGA
 
Protein sequence
MFKVLNMSST DRPDRPDGES DLTARARIRD AAIACFGQRG FGVSVRAIAE QAGVSPGLVI 
HHFGSKDKLR RACDDHVTAA VNEVKTDTVT SHDGQTFLHQ LATMEQYAPL LAYVVRSMQA
GGPLAAALFE RMVADIEVYL AAGEAEGTIR PSRDPARRAR YLAANSLGSL LLFLTLGRFG
EEVDFARVAR EWSREYMLPT LELYTEGLLT ERTILDAYLL YVGDPPEEPR