194 homologs were found in PanDaTox collection
for query gene Daci_4801 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_4801  extracellular solute-binding protein  100 
 
 
442 aa  899    Delftia acidovorans SPH-1  Bacteria  normal  0.433474  normal 
 
 
-
 
NC_008688  Pden_4658  extracellular solute-binding protein  48.3 
 
 
440 aa  382  1e-104  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_52130  periplasmic binding protein  32.38 
 
 
388 aa  192  8e-48  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1990  putative regulatory lipoprotein  34.02 
 
 
419 aa  186  7e-46  Methylobacillus flagellatus KT  Bacteria  normal  0.307134  normal 
 
 
-
 
NC_008700  Sama_3241  phosphoglycerate transport regulatory protein PgtC, putative  31.16 
 
 
419 aa  172  9e-42  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.560629 
 
 
-
 
NC_008322  Shewmr7_2751  putative phosphoglycerate transport regulatory protein PgtC  28.8 
 
 
437 aa  171  2e-41  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_2968  extracellular solute-binding protein  30.73 
 
 
445 aa  171  3e-41  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.812096 
 
 
-
 
NC_008321  Shewmr4_2683  putative phosphoglycerate transport regulatory protein PgtC  28.18 
 
 
437 aa  169  1e-40  Shewanella sp. MR-4  Bacteria  normal  0.322745  normal  0.30829 
 
 
-
 
NC_009456  VC0395_0644  putative phosphoglycerate transport regulatory protein PgtC  31.61 
 
 
440 aa  152  1e-35  Vibrio cholerae O395  Bacteria  normal  0.788627  n/a   
 
 
-
 
NC_008688  Pden_4655  putative regulatory lipoprotein  32.07 
 
 
395 aa  150  5e-35  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C2651  phosphoglycerate transport: protein for signal transmission  28.72 
 
 
407 aa  145  1e-33  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.0959912  hitchhiker  0.000467532 
 
 
-
 
NC_011080  SNSL254_A2587  phosphoglycerate transport: protein for signal transmission  28.72 
 
 
436 aa  145  1e-33  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.259528  normal 
 
 
-
 
NC_011149  SeAg_B2539  phosphoglycerate transport: protein for signal transmission  28.72 
 
 
436 aa  145  1e-33  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2628  phosphoglycerate transport: protein for signal transmission  28.72 
 
 
436 aa  145  1e-33  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_3495  extracellular solute-binding protein  28.68 
 
 
375 aa  134  3.9999999999999996e-30  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.0500866  normal  0.246878 
 
 
-
 
NC_008698  Tpen_1485  extracellular solute-binding protein  25.68 
 
 
470 aa  121  1.9999999999999998e-26  Thermofilum pendens Hrk 5  Archaea  normal  0.0472403  n/a   
 
 
-
 
NC_008701  Pisl_0075  extracellular solute-binding protein  28.25 
 
 
498 aa  120  3.9999999999999996e-26  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.735503  normal 
 
 
-
 
NC_009073  Pcal_0248  extracellular solute-binding protein  28.13 
 
 
511 aa  116  8.999999999999998e-25  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.370696 
 
 
-
 
NC_008698  Tpen_1808  extracellular solute-binding protein  25.37 
 
 
514 aa  115  1.0000000000000001e-24  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_010525  Tneu_1007  extracellular solute-binding protein  28.49 
 
 
485 aa  116  1.0000000000000001e-24  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.256846  decreased coverage  0.000168852 
 
 
-
 
NC_009376  Pars_1168  extracellular solute-binding protein  29.02 
 
 
516 aa  112  2.0000000000000002e-23  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  0.731614  normal  0.0353149 
 
 
-
 
NC_009667  Oant_1463  extracellular solute-binding protein  31.6 
 
 
326 aa  109  1e-22  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.512158  n/a   
 
 
-
 
NC_009635  Maeo_0333  extracellular solute-binding protein  29.92 
 
 
344 aa  109  1e-22  Methanococcus aeolicus Nankai-3  Archaea  normal  0.853179  n/a   
 
 
-
 
NC_008044  TM1040_0544  extracellular solute-binding protein  30.06 
 
 
322 aa  108  2e-22  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1586  extracellular solute-binding protein family 1  28.31 
 
 
333 aa  108  3e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_012857  Rpic12D_4607  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  30.34 
 
 
341 aa  106  1e-21  Ralstonia pickettii 12D  Bacteria  normal  0.980284  normal 
 
 
-
 
NC_010678  Rpic_4473  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  30.34 
 
 
341 aa  106  1e-21  Ralstonia pickettii 12J  Bacteria  normal  normal  0.144148 
 
 
-
 
NC_009456  VC0395_0545  ABC transporter, periplasmic substrate-binding protein  28.98 
 
 
339 aa  102  1e-20  Vibrio cholerae O395  Bacteria  hitchhiker  0.001131  n/a   
 
 
-
 
NC_009636  Smed_1948  extracellular solute-binding protein  31.95 
 
 
326 aa  101  2e-20  Sinorhizobium medicae WSM419  Bacteria  normal  0.113804  normal  0.383853 
 
 
-
 
NC_012850  Rleg_2736  extracellular solute-binding protein family 1  30.48 
 
 
325 aa  100  4e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.288744  normal 
 
 
-
 
NC_013457  VEA_000766  ABC transporter, periplasmic substrate-binding protein  27.44 
 
 
336 aa  100  4e-20  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4977  extracellular solute-binding protein family 1  30.6 
 
 
347 aa  100  6e-20  Variovorax paradoxus S110  Bacteria  normal  0.187207  n/a   
 
 
-
 
NC_009784  VIBHAR_04877  ABC-type Fe3+ transport system periplasmic component  27.44 
 
 
336 aa  98.2  3e-19  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009512  Pput_5008  extracellular solute-binding protein  29.35 
 
 
341 aa  97.8  4e-19  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5135  ABC transporter, periplasmic binding protein  29.07 
 
 
341 aa  97.1  6e-19  Pseudomonas putida KT2440  Bacteria  normal  0.659918  normal 
 
 
-
 
NC_007348  Reut_B5525  extracellular solute-binding protein  29.8 
 
 
340 aa  96.7  8e-19  Ralstonia eutropha JMP134  Bacteria  normal  0.655164  n/a   
 
 
-
 
NC_009620  Smed_4877  extracellular solute-binding protein  27.62 
 
 
340 aa  95.9  1e-18  Sinorhizobium medicae WSM419  Bacteria  normal  0.713524  normal  0.38801 
 
 
-
 
NC_003909  BCE_1436  iron compound ABC transporter, iron compound-binding protein, putative  27.17 
 
 
346 aa  95.1  2e-18  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3970  putative iron compound ABC transporter, iron compound-binding protein  27.61 
 
 
358 aa  95.5  2e-18  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2917  extracellular solute-binding protein family 1  30.07 
 
 
339 aa  95.1  2e-18  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0720  ABC transporter, periplasmic substrate-binding protein  28.57 
 
 
341 aa  94.7  3e-18  Brucella suis 1330  Bacteria  normal  0.631762  n/a   
 
 
-
 
NC_005945  BAS1235  iron compound ABC transporter iron compound-binding protein  27.17 
 
 
358 aa  94.7  3e-18  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1212  iron ABC transporter solute-binding protein  27.17 
 
 
358 aa  94.7  3e-18  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1214  iron ABC transporter solute-binding protein  27.17 
 
 
358 aa  94.7  3e-18  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1337  iron compound ABC transporter iron compound-binding protein  27.17 
 
 
358 aa  94.7  3e-18  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3199  extracellular solute-binding protein  27.72 
 
 
338 aa  94.7  3e-18  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.680045  n/a   
 
 
-
 
NC_012917  PC1_1545  extracellular solute-binding protein family 1  29.51 
 
 
339 aa  94.4  3e-18  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.061269  n/a   
 
 
-
 
NC_011773  BCAH820_1411  putative iron compound ABC transporter, iron compound-binding protein  27.17 
 
 
358 aa  94.7  3e-18  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009504  BOV_A0676  ABC transporter, periplasmic substrate-binding protein  28.57 
 
 
341 aa  94.7  3e-18  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1237  extracellular metal-binding protein  27.61 
 
 
358 aa  94  5e-18  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II0811  extracellular solute-binding protein  26.35 
 
 
351 aa  94  5e-18  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0330  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  28.28 
 
 
341 aa  94  5e-18  Pseudomonas putida W619  Bacteria  normal  normal  0.631264 
 
 
-
 
NC_010322  PputGB1_5188  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  28.92 
 
 
341 aa  93.6  6e-18  Pseudomonas putida GB-1  Bacteria  normal  0.491174  normal 
 
 
-
 
NC_011658  BCAH187_A1476  putative iron compound ABC transporter, iron compound-binding protein  26.81 
 
 
358 aa  93.2  8e-18  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1374  putative iron compound ABC transporter, iron compound-binding protein  26.81 
 
 
358 aa  92.4  1e-17  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009637  MmarC7_1107  extracellular solute-binding protein  27.27 
 
 
343 aa  92.8  1e-17  Methanococcus maripaludis C7  Archaea  normal  0.695758  normal 
 
 
-
 
NC_012880  Dd703_3231  extracellular solute-binding protein family 1  27.44 
 
 
325 aa  92.4  2e-17  Dickeya dadantii Ech703  Bacteria  normal  0.416701  n/a   
 
 
-
 
NC_013946  Mrub_1201  extracellular solute-binding protein family 1  30.66 
 
 
320 aa  91.7  3e-17  Meiothermus ruber DSM 1279  Bacteria  normal  0.941139  normal  0.523727 
 
 
-
 
NC_007492  Pfl01_5367  extracellular solute-binding protein  28.24 
 
 
341 aa  91.3  3e-17  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2481  extracellular solute-binding protein family 1  29.9 
 
 
330 aa  91.3  3e-17  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.37214  normal  0.635435 
 
 
-
 
NC_008686  Pden_1078  extracellular solute-binding protein  28.26 
 
 
322 aa  91.3  3e-17  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_3115  extracellular solute-binding protein  27.24 
 
 
342 aa  90.1  7e-17  Serratia proteamaculans 568  Bacteria  normal  0.0701659  normal 
 
 
-
 
NC_007348  Reut_B5874  extracellular solute-binding protein  28.42 
 
 
341 aa  89.7  1e-16  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2899  extracellular solute-binding protein  26 
 
 
345 aa  89.4  1e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  decreased coverage  0.00994055 
 
 
-
 
NC_009135  MmarC5_1570  extracellular solute-binding protein  25.76 
 
 
350 aa  88.6  2e-16  Methanococcus maripaludis C5  Archaea  normal  0.840173  n/a   
 
 
-
 
NC_009654  Mmwyl1_0120  extracellular solute-binding protein  28.47 
 
 
340 aa  88.2  2e-16  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK1563  ABC transporter, substrate-binding protein  27.74 
 
 
341 aa  87.8  3e-16  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2746  ABC transporter periplasmic substrate-binding protein  26.72 
 
 
335 aa  87.8  3e-16  Psychromonas ingrahamii 37  Bacteria  normal  0.553799  normal 
 
 
-
 
NC_010184  BcerKBAB4_1611  extracellular solute-binding protein  26.35 
 
 
341 aa  87  5e-16  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.257155  n/a   
 
 
-
 
NC_010002  Daci_1282  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  28.05 
 
 
347 aa  87  6e-16  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A1866  putative ABC transporter, substrate-binding protein  26.84 
 
 
341 aa  87  6e-16  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1048  extracellular solute-binding protein  26.73 
 
 
356 aa  85.9  0.000000000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1991  extracellular solute-binding protein family 1  28.16 
 
 
342 aa  85.9  0.000000000000001  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.000248153  normal 
 
 
-
 
NC_011725  BCB4264_A1753  putative ABC transporter, substrate-binding protein  26.47 
 
 
341 aa  85.9  0.000000000000001  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1097  extracellular solute-binding protein family 1  27.36 
 
 
337 aa  85.9  0.000000000000001  Variovorax paradoxus S110  Bacteria  normal  0.0890714  n/a   
 
 
-
 
NC_009636  Smed_3281  extracellular solute-binding protein  25.95 
 
 
343 aa  86.3  0.000000000000001  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_1812  ABC transporter, substrate-binding protein, putative  26.47 
 
 
341 aa  85.5  0.000000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  0.98446  n/a   
 
 
-
 
NC_011772  BCG9842_B3590  putative ABC transporter, substrate-binding protein  26.88 
 
 
341 aa  84.7  0.000000000000003  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A6494  ABC Fe3+ siderophore transporter, periplasmic ligand binding protein  26.62 
 
 
351 aa  84.3  0.000000000000004  Burkholderia sp. 383  Bacteria  decreased coverage  0.000128013  normal  0.750448 
 
 
-
 
NC_011369  Rleg2_1762  extracellular solute-binding protein family 1  27.54 
 
 
340 aa  84  0.000000000000006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.66245  normal  0.133818 
 
 
-
 
NC_005957  BT9727_1572  ABC transporter, substrate-binding protein  27.84 
 
 
341 aa  83.6  0.000000000000006  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1786  putative ABC transporter, substrate-binding protein  27.84 
 
 
341 aa  84  0.000000000000006  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS1611  ABC transporter substrate-binding protein  27.84 
 
 
341 aa  83.6  0.000000000000007  Bacillus anthracis str. Sterne  Bacteria  normal  0.791321  n/a   
 
 
-
 
NC_007530  GBAA_1735  ABC transporter substrate-binding protein  27.84 
 
 
341 aa  83.6  0.000000000000007  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.313912  n/a   
 
 
-
 
NC_008346  Swol_2479  ABC transporter, periplasmic substrate-binding protein  26.37 
 
 
347 aa  83.6  0.000000000000007  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0970  extracellular solute-binding protein  26.94 
 
 
340 aa  83.2  0.000000000000009  Verminephrobacter eiseniae EF01-2  Bacteria  decreased coverage  0.00000273849  normal 
 
 
-
 
NC_012852  Rleg_6060  extracellular solute-binding protein family 1  26.88 
 
 
340 aa  82.4  0.00000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_3752  extracellular solute-binding protein  25.63 
 
 
342 aa  82.4  0.00000000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.236177  normal 
 
 
-
 
NC_010508  Bcenmc03_3159  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  26.62 
 
 
351 aa  82.4  0.00000000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.451295  normal  0.0280644 
 
 
-
 
NC_010084  Bmul_3135  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  26.74 
 
 
351 aa  82.4  0.00000000000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.0000124491 
 
 
-
 
NC_013171  Apre_0051  extracellular solute-binding protein family 1  26.47 
 
 
378 aa  80.9  0.00000000000004  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.115612  n/a   
 
 
-
 
NC_011353  ECH74115_0435  extracellular solute-binding protein, family 1  28.17 
 
 
343 aa  79.7  0.0000000000001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_012852  Rleg_6061  extracellular solute-binding protein family 1  26.44 
 
 
342 aa  79.7  0.0000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_2833  extracellular solute-binding protein  25.17 
 
 
320 aa  78.2  0.0000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.235826  n/a   
 
 
-
 
NC_009436  Ent638_0833  extracellular solute-binding protein  27.08 
 
 
343 aa  78.6  0.0000000000002  Enterobacter sp. 638  Bacteria  normal  normal  0.752683 
 
 
-
 
NC_008752  Aave_3891  extracellular solute-binding protein  26.01 
 
 
327 aa  75.9  0.000000000001  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1366  extracellular solute-binding protein family 1  29.91 
 
 
344 aa  75.5  0.000000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.755106  n/a   
 
 
-
 
NC_011369  Rleg2_1761  extracellular solute-binding protein family 1  26.35 
 
 
341 aa  75.5  0.000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.893641  normal  0.0475771 
 
 
-
 
NC_009073  Pcal_0214  ABC transporter periplasmic-binding protein  30.54 
 
 
337 aa  74.7  0.000000000003  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.308816 
 
 
-
 
NC_009073  Pcal_0650  hypothetical protein  30.3 
 
 
467 aa  74.7  0.000000000003  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
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