More than 300 homologs were found in PanDaTox collection
for query gene DvMF_1586 on replicon NC_011769
Organism: Desulfovibrio vulgaris str. 'Miyazaki F'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011769  DvMF_1586  extracellular solute-binding protein family 1  100 
 
 
333 aa  676    Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007643  Rru_A3199  extracellular solute-binding protein  33.22 
 
 
338 aa  165  9e-40  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.680045  n/a   
 
 
-
 
NC_008044  TM1040_0544  extracellular solute-binding protein  33.57 
 
 
322 aa  159  8e-38  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_1948  extracellular solute-binding protein  33.55 
 
 
326 aa  159  9e-38  Sinorhizobium medicae WSM419  Bacteria  normal  0.113804  normal  0.383853 
 
 
-
 
NC_009654  Mmwyl1_0120  extracellular solute-binding protein  32.79 
 
 
340 aa  155  1e-36  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2736  extracellular solute-binding protein family 1  33.22 
 
 
325 aa  152  7e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.288744  normal 
 
 
-
 
NC_012880  Dd703_3231  extracellular solute-binding protein family 1  31.7 
 
 
325 aa  151  2e-35  Dickeya dadantii Ech703  Bacteria  normal  0.416701  n/a   
 
 
-
 
NC_013946  Mrub_1201  extracellular solute-binding protein family 1  29.93 
 
 
320 aa  148  1.0000000000000001e-34  Meiothermus ruber DSM 1279  Bacteria  normal  0.941139  normal  0.523727 
 
 
-
 
NC_008686  Pden_1078  extracellular solute-binding protein  30.5 
 
 
322 aa  143  4e-33  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2481  extracellular solute-binding protein family 1  31.92 
 
 
330 aa  142  7e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.37214  normal  0.635435 
 
 
-
 
NC_009667  Oant_1463  extracellular solute-binding protein  30.91 
 
 
326 aa  140  3e-32  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.512158  n/a   
 
 
-
 
NC_008698  Tpen_1554  extracellular solute-binding protein  31.34 
 
 
354 aa  130  3e-29  Thermofilum pendens Hrk 5  Archaea  normal  0.202841  n/a   
 
 
-
 
NC_009620  Smed_4877  extracellular solute-binding protein  31.51 
 
 
340 aa  126  5e-28  Sinorhizobium medicae WSM419  Bacteria  normal  0.713524  normal  0.38801 
 
 
-
 
NC_008346  Swol_2479  ABC transporter, periplasmic substrate-binding protein  30.77 
 
 
347 aa  124  2e-27  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4607  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  30.88 
 
 
341 aa  123  4e-27  Ralstonia pickettii 12D  Bacteria  normal  0.980284  normal 
 
 
-
 
NC_010678  Rpic_4473  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  30.88 
 
 
341 aa  123  4e-27  Ralstonia pickettii 12J  Bacteria  normal  normal  0.144148 
 
 
-
 
NC_002967  TDE0386  ABC transporter, periplasmic substrate-binding protein  31.31 
 
 
338 aa  123  5e-27  Treponema denticola ATCC 35405  Bacteria  decreased coverage  0.00000551212  n/a   
 
 
-
 
NC_011772  BCG9842_B3590  putative ABC transporter, substrate-binding protein  29.07 
 
 
341 aa  122  9.999999999999999e-27  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_1812  ABC transporter, substrate-binding protein, putative  28.78 
 
 
341 aa  120  1.9999999999999998e-26  Bacillus cereus ATCC 10987  Bacteria  normal  0.98446  n/a   
 
 
-
 
NC_012917  PC1_1221  extracellular solute-binding protein family 1  30.77 
 
 
326 aa  120  1.9999999999999998e-26  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.141693  n/a   
 
 
-
 
NC_011658  BCAH187_A1866  putative ABC transporter, substrate-binding protein  29.07 
 
 
341 aa  120  1.9999999999999998e-26  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1563  ABC transporter, substrate-binding protein  29.07 
 
 
341 aa  120  3e-26  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1753  putative ABC transporter, substrate-binding protein  28.49 
 
 
341 aa  119  6e-26  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1611  extracellular solute-binding protein  28.49 
 
 
341 aa  119  7.999999999999999e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.257155  n/a   
 
 
-
 
NC_008688  Pden_4658  extracellular solute-binding protein  29.04 
 
 
440 aa  118  9.999999999999999e-26  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_1419  ABC transporter, periplasmic substrate-binding protein  28.82 
 
 
353 aa  117  1.9999999999999998e-25  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA3071  ABC transporter, periplasmic substrate-binding protein  28.82 
 
 
353 aa  118  1.9999999999999998e-25  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1412  ABC transporter, periplasmic substrate-binding protein  28.82 
 
 
353 aa  118  1.9999999999999998e-25  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009637  MmarC7_1107  extracellular solute-binding protein  29.19 
 
 
343 aa  117  1.9999999999999998e-25  Methanococcus maripaludis C7  Archaea  normal  0.695758  normal 
 
 
-
 
NC_008785  BMASAVP1_A1215  ABC transporter, periplasmic substrate-binding protein  28.82 
 
 
353 aa  118  1.9999999999999998e-25  Burkholderia mallei SAVP1  Bacteria  normal  0.0399502  n/a   
 
 
-
 
NC_009668  Oant_2833  extracellular solute-binding protein  29.34 
 
 
320 aa  117  1.9999999999999998e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.235826  n/a   
 
 
-
 
NC_009080  BMA10247_0501  ABC transporter, periplasmic substrate-binding protein  28.82 
 
 
353 aa  118  1.9999999999999998e-25  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0652  ABC transporter, periplasmic substrate-binding protein  28.82 
 
 
353 aa  118  1.9999999999999998e-25  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0833  extracellular solute-binding protein  30.93 
 
 
343 aa  116  3.9999999999999997e-25  Enterobacter sp. 638  Bacteria  normal  normal  0.752683 
 
 
-
 
NC_011353  ECH74115_0435  extracellular solute-binding protein, family 1  29.66 
 
 
343 aa  116  5e-25  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2070  extracellular solute-binding protein  29.96 
 
 
322 aa  116  5e-25  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_1572  ABC transporter, substrate-binding protein  29.07 
 
 
341 aa  116  6e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0625  iron(III) ABC transporter, periplasmic iron-compound-binding protein  29.69 
 
 
344 aa  116  6.9999999999999995e-25  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1786  putative ABC transporter, substrate-binding protein  30.62 
 
 
341 aa  115  1.0000000000000001e-24  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008309  HS_0643  Fe3+ ABC transporter, iron-binding protein  29.15 
 
 
346 aa  115  1.0000000000000001e-24  Haemophilus somnus 129PT  Bacteria  hitchhiker  0.000121089  n/a   
 
 
-
 
NC_005945  BAS1611  ABC transporter substrate-binding protein  28.78 
 
 
341 aa  114  2.0000000000000002e-24  Bacillus anthracis str. Sterne  Bacteria  normal  0.791321  n/a   
 
 
-
 
NC_007434  BURPS1710b_1545  ABC transporter, periplasmic substrate-binding protein  28.82 
 
 
844 aa  114  2.0000000000000002e-24  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1735  ABC transporter substrate-binding protein  28.78 
 
 
341 aa  114  2.0000000000000002e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.313912  n/a   
 
 
-
 
NC_009635  Maeo_0333  extracellular solute-binding protein  28.08 
 
 
344 aa  114  2.0000000000000002e-24  Methanococcus aeolicus Nankai-3  Archaea  normal  0.853179  n/a   
 
 
-
 
NC_010551  BamMC406_1116  extracellular solute-binding protein  29.43 
 
 
361 aa  113  4.0000000000000004e-24  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5367  extracellular solute-binding protein  28.99 
 
 
341 aa  113  4.0000000000000004e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0330  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  29.01 
 
 
341 aa  113  4.0000000000000004e-24  Pseudomonas putida W619  Bacteria  normal  normal  0.631264 
 
 
-
 
NC_010002  Daci_1282  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  27.49 
 
 
347 aa  113  6e-24  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_5008  extracellular solute-binding protein  28.99 
 
 
341 aa  112  8.000000000000001e-24  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1418  extracellular solute-binding protein family 1  29.43 
 
 
343 aa  112  1.0000000000000001e-23  Ralstonia pickettii 12J  Bacteria  normal  0.58033  normal  0.12139 
 
 
-
 
NC_002947  PP_5135  ABC transporter, periplasmic binding protein  28.45 
 
 
341 aa  111  2.0000000000000002e-23  Pseudomonas putida KT2440  Bacteria  normal  0.659918  normal 
 
 
-
 
NC_003295  RSc1791  solute-binding periplasmic (PBP) ABC transporter protein  29.87 
 
 
343 aa  110  2.0000000000000002e-23  Ralstonia solanacearum GMI1000  Bacteria  normal  0.450613  normal  0.0698003 
 
 
-
 
NC_007348  Reut_B5525  extracellular solute-binding protein  31.51 
 
 
340 aa  111  2.0000000000000002e-23  Ralstonia eutropha JMP134  Bacteria  normal  0.655164  n/a   
 
 
-
 
NC_007948  Bpro_4694  extracellular solute-binding protein  28.13 
 
 
349 aa  111  2.0000000000000002e-23  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_1117  extracellular solute-binding protein  29.14 
 
 
361 aa  111  2.0000000000000002e-23  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_3135  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  30.04 
 
 
351 aa  110  3e-23  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.0000124491 
 
 
-
 
NC_010508  Bcenmc03_1208  extracellular solute-binding protein  28.35 
 
 
342 aa  110  4.0000000000000004e-23  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.527758  normal 
 
 
-
 
NC_012880  Dd703_2485  extracellular solute-binding protein family 1  29.48 
 
 
343 aa  110  5e-23  Dickeya dadantii Ech703  Bacteria  normal  0.390798  n/a   
 
 
-
 
NC_007510  Bcep18194_A4343  ABC transporter, periplasmic ligand binding protein  28.29 
 
 
370 aa  110  5e-23  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_2074  extracellular solute-binding protein  28.35 
 
 
342 aa  109  8.000000000000001e-23  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5188  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  28.34 
 
 
341 aa  109  8.000000000000001e-23  Pseudomonas putida GB-1  Bacteria  normal  0.491174  normal 
 
 
-
 
NC_013205  Aaci_0041  extracellular solute-binding protein family 1  29.13 
 
 
336 aa  108  1e-22  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A6494  ABC Fe3+ siderophore transporter, periplasmic ligand binding protein  29.81 
 
 
351 aa  108  1e-22  Burkholderia sp. 383  Bacteria  decreased coverage  0.000128013  normal  0.750448 
 
 
-
 
NC_012856  Rpic12D_1459  extracellular solute-binding protein family 1  29.25 
 
 
343 aa  107  3e-22  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0283759 
 
 
-
 
NC_007951  Bxe_A1468  ABC polyamine transporter, periplasmic ligand binding protein  25.71 
 
 
349 aa  107  3e-22  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.119305 
 
 
-
 
NC_010508  Bcenmc03_3159  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  29.81 
 
 
351 aa  107  4e-22  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.451295  normal  0.0280644 
 
 
-
 
NC_007651  BTH_I2829  ABC transporter, periplasmic substrate-binding protein  28.8 
 
 
353 aa  106  4e-22  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_0753  extracellular solute-binding protein  28.04 
 
 
365 aa  107  4e-22  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1234  extracellular solute-binding protein  28.04 
 
 
365 aa  107  4e-22  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009135  MmarC5_1570  extracellular solute-binding protein  28.93 
 
 
350 aa  106  6e-22  Methanococcus maripaludis C5  Archaea  normal  0.840173  n/a   
 
 
-
 
NC_013515  Smon_0283  extracellular solute-binding protein family 1  26.57 
 
 
342 aa  106  7e-22  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_010681  Bphyt_2648  extracellular solute-binding protein family 1  27.19 
 
 
362 aa  106  7e-22  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.370022 
 
 
-
 
NC_010622  Bphy_1501  extracellular solute-binding protein  27.49 
 
 
348 aa  105  8e-22  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013171  Apre_0051  extracellular solute-binding protein family 1  27.87 
 
 
378 aa  105  1e-21  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.115612  n/a   
 
 
-
 
NC_011313  VSAL_II0811  extracellular solute-binding protein  26.63 
 
 
351 aa  104  2e-21  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0970  extracellular solute-binding protein  27.98 
 
 
340 aa  103  3e-21  Verminephrobacter eiseniae EF01-2  Bacteria  decreased coverage  0.00000273849  normal 
 
 
-
 
NC_009523  RoseRS_2294  extracellular solute-binding protein  31.2 
 
 
381 aa  103  3e-21  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4801  extracellular solute-binding protein  27.72 
 
 
442 aa  104  3e-21  Delftia acidovorans SPH-1  Bacteria  normal  0.433474  normal 
 
 
-
 
NC_008752  Aave_3891  extracellular solute-binding protein  25.44 
 
 
327 aa  103  4e-21  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1366  extracellular solute-binding protein family 1  28.52 
 
 
344 aa  103  5e-21  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.755106  n/a   
 
 
-
 
NC_009456  VC0395_0545  ABC transporter, periplasmic substrate-binding protein  25.75 
 
 
339 aa  102  7e-21  Vibrio cholerae O395  Bacteria  hitchhiker  0.001131  n/a   
 
 
-
 
NC_007974  Rmet_4840  putative ABC transporter periplasmic binding component  29.06 
 
 
340 aa  102  1e-20  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0305994 
 
 
-
 
NC_014210  Ndas_1913  extracellular solute-binding protein family 1  27.21 
 
 
348 aa  102  1e-20  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0831866  normal  0.645841 
 
 
-
 
NC_013421  Pecwa_1772  extracellular solute-binding protein family 1  28.9 
 
 
344 aa  101  2e-20  Pectobacterium wasabiae WPP163  Bacteria  normal  0.320595  n/a   
 
 
-
 
NC_008309  HS_0641  Fe3+ ABC transporter, iron-binding protein  26.98 
 
 
343 aa  101  2e-20  Haemophilus somnus 129PT  Bacteria  normal  0.147653  n/a   
 
 
-
 
NC_007778  RPB_4046  putative periplasmic solute-binding protein  31.49 
 
 
335 aa  100  4e-20  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0699034  normal 
 
 
-
 
NC_009767  Rcas_3171  extracellular solute-binding protein  30.48 
 
 
382 aa  100  5e-20  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3454  putative periplasmic solute-binding protein  30.7 
 
 
337 aa  99  1e-19  Acidovorax citrulli AAC00-1  Bacteria  normal  0.357351  normal  0.433387 
 
 
-
 
NC_009784  VIBHAR_04877  ABC-type Fe3+ transport system periplasmic component  25.58 
 
 
336 aa  99  1e-19  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007947  Mfla_1990  putative regulatory lipoprotein  27.14 
 
 
419 aa  99  1e-19  Methylobacillus flagellatus KT  Bacteria  normal  0.307134  normal 
 
 
-
 
NC_013457  VEA_000766  ABC transporter, periplasmic substrate-binding protein  25.29 
 
 
336 aa  97.8  2e-19  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1762  extracellular solute-binding protein family 1  28.92 
 
 
340 aa  97.8  2e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.66245  normal  0.133818 
 
 
-
 
NC_011004  Rpal_1663  extracellular solute-binding protein family 1  31.67 
 
 
335 aa  97.1  3e-19  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3495  extracellular solute-binding protein  24.68 
 
 
375 aa  97.1  4e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.0500866  normal  0.246878 
 
 
-
 
NC_008346  Swol_2476  ABC-type iron(III)-binding periplasmic protein precursor  30.08 
 
 
364 aa  96.7  5e-19  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.00000339151  n/a   
 
 
-
 
NC_007348  Reut_B5874  extracellular solute-binding protein  27.08 
 
 
341 aa  96.3  6e-19  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1588  extracellular solute-binding protein  26.18 
 
 
368 aa  95.9  8e-19  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1374  putative iron compound ABC transporter, iron compound-binding protein  25.64 
 
 
358 aa  95.1  1e-18  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2899  extracellular solute-binding protein  28.52 
 
 
345 aa  95.1  1e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  decreased coverage  0.00994055 
 
 
-
 
NC_012560  Avin_52130  periplasmic binding protein  27.54 
 
 
388 aa  94.7  2e-18  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
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