| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4977 |
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| Symbol | |
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| ID | 7974259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5289749 |
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| End bp | 5290792 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795572 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002946847 |
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| Protein GI | 239817937 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.187207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCCCT TTGTCCAGAG GAATGCCGCG GCCCTTGCCG CCTGCGCGGG CGCCATGGCC
TTGCTTTTTG CTTCGGGCGC GGCGGCCGAG GGCACGGTGA ATGCGCTGTG CAGCACCGAC
GCGGGCTGGT GCGAAGCCGC GGCCGCCGCC TTCACGCGCG AGACCGGCAT CCGGGTGCAG
CAGGCGCACA AGGGCACCGG CGAGATCGGC GCCCAGCTGC GCGCCGAGGC CGCCAATCCC
AAGACCGACA TCTGGTGGGG CGGCACCGGC GACCCGTTCC TGCAGGCGGC CGAGCAAGGC
CTGCTCGAAG CCTACCGGCC GGCCTACATC AATGACCTGC ACGATTGGTC GGTGCGCCAG
TACGCGATGT CGCAGAACAT GGTGGGCGGC TTCTACACCA GCGCCATCGG CTTCGGCTTC
AACACCGAGC TGCTCAGGCG CAAGAAGCTG CACGAGCCCA AATGCTGGGC CGACCTCGCC
AAGCCCGAAT ACCGGGGCGA GATCGAGATC TCGCATCCGG CCTCCAGCGG CACGGCCTAC
ACCATCATCG CGGGCCTGGT GCAGCAGATG GGCGAGGACG CGGCCTTCGA CTATCTGAAG
AAGCTGCACC GCAACGTCAC CAGCTACACC CGCAGCGGCC AGGCGCAGGC GCCCAACGTG
GCCAAGGGCG AGGTGGCAGT GGGCGTGAGC TTCATCTTCG GCTTCGAGCG CTGGCGGTAT
GACAAATTCC CGGTCAAGAC GGCCGCGCCC TGCGAGGGCA CGAGCTACGA GGTCGGCGGC
ATCGCGCTGG TCAAGGGCGC GCGCAACAAG GAGAATGCGA AGCGCTACTA CGACTGGCTC
ATGAGCCCGG CCGGCCAGGC GATCGGCGGG CAGGTCGGCA GCCTGCAGTC GCCCGCCAAC
AAGACCTTCA AGCCCGATCC GCGCATTCCC TCGATGAGCG ACGTGAAGCT CATCAAGTAC
GACTTCGAGA AATACGGCAG GGCCGCCGAG CGCAAGCGGC TGATCGACCG CTGGACCCGC
GAGGTGGAAT CGCAGGCCCG GTAG
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| Protein sequence | MRPFVQRNAA ALAACAGAMA LLFASGAAAE GTVNALCSTD AGWCEAAAAA FTRETGIRVQ
QAHKGTGEIG AQLRAEAANP KTDIWWGGTG DPFLQAAEQG LLEAYRPAYI NDLHDWSVRQ
YAMSQNMVGG FYTSAIGFGF NTELLRRKKL HEPKCWADLA KPEYRGEIEI SHPASSGTAY
TIIAGLVQQM GEDAAFDYLK KLHRNVTSYT RSGQAQAPNV AKGEVAVGVS FIFGFERWRY
DKFPVKTAAP CEGTSYEVGG IALVKGARNK ENAKRYYDWL MSPAGQAIGG QVGSLQSPAN
KTFKPDPRIP SMSDVKLIKY DFEKYGRAAE RKRLIDRWTR EVESQAR
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