Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5188 |
Symbol | |
ID | 5873002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5800656 |
End bp | 5801681 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641550324 |
Product | 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component |
Protein accession | YP_001671406 |
Protein GI | 167036175 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | [TIGR03261] putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.491174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTACAAGC ACCTTGCACT TGCCGCTGCT GTTTGCGCCG TGTTCAGCCT GCAGGCTTCG GCCGCCAATA CCCAGCTGAC GGTCTACACC GCGCTGGAAG CCGAGCAATT GAAGAGCTAC AAACAAGCCT TCGAAAAAGC CAACCCGGAT ATCGAGATAA AGTGGGTGCG TGATTCCACC GGCATCATCA CCGCCAAGCT GCTGGCCGAG AAAGACCGCC CGCAAGCCGA CGCGGTTTGG GGCCTGGCGG CGTCCAGCCT GGCGATTCTC GACCAGAACG GCATGCTTGA AGCCTATGCA CCGAAAGACC TGGGCAAGAT CTCCGGCAAC TACCGGGACG CTGCCAACCC TCCGGCTTGG GTGGGTATGG ATGTGTGGGC CGCGACCATC TGCTTCAATA CCATCGAGGC CGAGAAGCAG GGCCTGAGCA AACCGGTGAG CTGGCAGGAC CTGACCAAGC CCGAGTACAA GGGCAAGATC GTCATGCCCA ACCCGGCCTC GTCCGGCACC GGTTTCCTTG ACGTGAGTGC CTGGTTGCAG ACCTTCGGTG AACCGCAAGG CTGGGCCTAC ATGGACGCGC TGCACCAGAA CATCGGCCAG TACGTTCATT CCGGCTCCAA ACCGTGCAAG CTGGCAGCGG CAGGCGAGTT CCCGATCGGT ATTTCGTTCG AATACCCGGC CGTGCAGCTC AAGCGCCAGG GCGCCCCCCT GGACATCGTG CTGCCGAAGG AAGGCCTGGG TTGGGAGATC GAGGCGACTG CAGTGATCAA GGGCTCGCCC AAGGCGAATG CGGCCAAGCG CCTGGCTGAT TTCTCGGCAA GCCCGGCGGC CATGGAGCTG TACAAGGAAA ACTTCGCCGT GCTGGCCGCG CCAGGCATTG CCAAGCCGCA GACCGAGTTG CCGGCAGACT ATGAGCAGCG CCTGATCAAG AACGACTTTG CCTGGGCTTC GAAAAACCGG GATGAAATCC TGACCGAATG GCGCAAGCGC TATGACGGCA AGTCGGAGAA GGTGGCCCAG CAGTAA
|
Protein sequence | MYKHLALAAA VCAVFSLQAS AANTQLTVYT ALEAEQLKSY KQAFEKANPD IEIKWVRDST GIITAKLLAE KDRPQADAVW GLAASSLAIL DQNGMLEAYA PKDLGKISGN YRDAANPPAW VGMDVWAATI CFNTIEAEKQ GLSKPVSWQD LTKPEYKGKI VMPNPASSGT GFLDVSAWLQ TFGEPQGWAY MDALHQNIGQ YVHSGSKPCK LAAAGEFPIG ISFEYPAVQL KRQGAPLDIV LPKEGLGWEI EATAVIKGSP KANAAKRLAD FSASPAAMEL YKENFAVLAA PGIAKPQTEL PADYEQRLIK NDFAWASKNR DEILTEWRKR YDGKSEKVAQ Q
|
| |