Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4801 |
Symbol | |
ID | 5750404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5298272 |
End bp | 5299600 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641299917 |
Product | extracellular solute-binding protein |
Protein accession | YP_001565815 |
Protein GI | 160900233 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.433474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCAAC GCAGATGGCT GACGGCCGCC ATGGCCGCAG GATTGGGGGG CGCCGCCATG GCGGCCCAGG CCGGCACGGT GACGGTGCTG ACCTCGTTTC CCAAGGAGCT GACCACGGCC TACCAGAAGG CCTTCGAGGC GGCCAATCCG GGGATCAAGA TCGAGATCCT GAACAAGAAC ACCACGGCTG CCGTAGCGTA TGTGCGCGAG TTGCCCGAGG GCCAGCGGCC CGACATCATG TGGGCCAGCG CCCCTGATGC CTTCGAGGTG CTGGCGCGCA ACAAGCTGCT GACCGCCGCG CCCGAGACGC GCAATCCGGC CGCGCCCGCC AAGATCGGCA ACTACCCGCT CAACGACCCG CAGGGCCTGT ACTACGGCCA GGCGCTGGCC GGCTACGGAA TCATGTGGAA CACGCGCTAC CTGAAGGCGC ACAAGCTGGC GGCGCCCAAG GAGTGGAGCG ATCTGACGCG GCCCGAGTAC TTCGGCCACA TCGCCATCTC CTCGCCCTCG CGCTCGGGCA CCACGCAGTT GACGGTGGAG ACCATCCTGC AGGGCGAGGG CTGGGACAAG GGCTGGCGCC AGCTGCTGTC CATGATGGGC AATGCCGCTG CCGTGACCGA CCGCAGCTTT GCCGTGCCCG ATGGCGTGAA CAACGGCCAG TACGGCATAG GCATCGTGAT CGATTTCTTC GGGCTGGCGG GCAAGTACTC GGGCTTCCCG GTGGACTTCG CCTACCCGGC GATGACGGCC GTGGTGCCGG CCAACATCGC GCTGATCGCG GGCGCCAAGA ATGCCGATGA GGCCCGCAAG TTCATGGCCT TCACCATGTC GGTGCCGGGC CAGCAGCTGC TGTTCGACCC CAAGATCAGC CGCCTGCCCA TCCTGCCCTA CAGCCAGCTC AAGGCGCCGG CCGGCTACCC GGTGCCGCAG GAGGTGGCGC AGCGCGCCAA GGTGCAGTTC GACGCCAACC TGTCCGAGTC GCGCTATGCC GTGGTGATCA GCCTGTTCGA CCAGATGGTG ACCTTCCGCC TCAAGGAACT GCAGGCGGCC ACGCGCGCCA TCCAGGAGGC GCACAAGGCC CTGCAGGCCA AGCCCAATGC CAAGGGGCAG GAGCTGCTGG CGCAGGCGCG CGACATCGCC TACTCGCCGC TGGTGGGCGA AGCCAATGTG AAGGACGAGC AGTTTCTGGA GCTGTTCCGC AAGAGCCGGC GCGATGTGGC CGTGTCCAAG GAGCTGACGG GCCTGGAGCA GATGTGGGCC GACAAGGCGC GTGCCAACTA CGAGCGCGCG GCCAAGCTGG CGGCCGAGGC GCGCGGCCTG GCCCGGTAG
|
Protein sequence | MQQRRWLTAA MAAGLGGAAM AAQAGTVTVL TSFPKELTTA YQKAFEAANP GIKIEILNKN TTAAVAYVRE LPEGQRPDIM WASAPDAFEV LARNKLLTAA PETRNPAAPA KIGNYPLNDP QGLYYGQALA GYGIMWNTRY LKAHKLAAPK EWSDLTRPEY FGHIAISSPS RSGTTQLTVE TILQGEGWDK GWRQLLSMMG NAAAVTDRSF AVPDGVNNGQ YGIGIVIDFF GLAGKYSGFP VDFAYPAMTA VVPANIALIA GAKNADEARK FMAFTMSVPG QQLLFDPKIS RLPILPYSQL KAPAGYPVPQ EVAQRAKVQF DANLSESRYA VVISLFDQMV TFRLKELQAA TRAIQEAHKA LQAKPNAKGQ ELLAQARDIA YSPLVGEANV KDEQFLELFR KSRRDVAVSK ELTGLEQMWA DKARANYERA AKLAAEARGL AR
|
| |