| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3281 |
|---|
| Symbol | |
|---|
| ID | 5324166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 3472941 |
|---|
| End bp | 3473972 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640792235 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001328940 |
|---|
| Protein GI | 150398473 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAG CAATGTCAGC CAGCATGGTC GCATTTGGCG TAGCGCTCAG TGCATCGACA
GGTCTCGCCG AAGAGTTGAA CGTGGTCTGC TCGAACGAGC AGGCATGGTG TGACCTCATG
GCCCAGAATT TCGAGATCGA AACGGGTATC GATGTCGCCA TAGTGCGCAA AAGCACCGGC
GAGGTCCTGG CGCAGCTTCG CGCTGAAAAA GGGAATCCGA AGGTCGATGT CTGGTGGGGC
GGTACGGGCG ATCCGCATAT CATCGCTGCC AATGAGGGAC TGACCACCGC AAGTGGTGTC
GATCTGTCCG GCACTGTGGG TTGGGCACAG AATATGGCCG AGATGACCAA AGGCCGGACA
GTCGGGGTCC ATGTCGGGTT GCTGGGAATG ATCTATAATA CGGAGCTTCT TGCCGAGAAG
GGCCTAACAG CCCCCGCCTG CTGGCGCGAT CTTGCCAAGC CCGAATACAA GGGAGAAATC
CAGGTTGCCA ACCCCAATTC TTCGGGAACC GCCTATACCG AGTTGGCGAC ATTGGTTCAG
CTTTTCGGAG AAGAGGAAGG CTTTCAGCTG CTTGCGGATA TCGGCCGTAA TGTGAACCAG
TACACCAAGT CCGGTTCTGC TCCCAGCAAG GCGACCGCAC GTGGCGAGAC GACCATCGGC
ATAGGCTTTA TTCATGACAT GGTCAGCCTG AAGAAAGCCG GCTTCCCGGT TACCATTGTT
TCTCCTTGCG AGGGAACCGG ATACGAACTT GGCGCCGTAA GCATCGTTGA TGGTGCGAAT
AACCTCGAAG CGGCGAAGAG GTGGGTTGAA TACGTCATAT CTGCCGAAGC GCAAGACGCA
GCGCTTCAAG TCGGCATTTA TACCATCCCG TCTAACCCCA ATGCTAAAAC GGATCCTGAT
GCACCGGATA TGAATTCGGT CAAGCTGATT GATTATGACT TCATGACTTA TGGCGCTACC
AAAACGCGCA CGCGCCTGTT GGATCGCTGG ACCGCCGAAG TCAAGAACGC CGGCGGAGCA
ATCGAAGAGT AA
|
|---|
| Protein sequence | MKTAMSASMV AFGVALSAST GLAEELNVVC SNEQAWCDLM AQNFEIETGI DVAIVRKSTG
EVLAQLRAEK GNPKVDVWWG GTGDPHIIAA NEGLTTASGV DLSGTVGWAQ NMAEMTKGRT
VGVHVGLLGM IYNTELLAEK GLTAPACWRD LAKPEYKGEI QVANPNSSGT AYTELATLVQ
LFGEEEGFQL LADIGRNVNQ YTKSGSAPSK ATARGETTIG IGFIHDMVSL KKAGFPVTIV
SPCEGTGYEL GAVSIVDGAN NLEAAKRWVE YVISAEAQDA ALQVGIYTIP SNPNAKTDPD
APDMNSVKLI DYDFMTYGAT KTRTRLLDRW TAEVKNAGGA IEE
|
|---|
| |