| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4877 |
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| Symbol | |
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| ID | 5318924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1382989 |
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| End bp | 1384011 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776662 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001313594 |
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| Protein GI | 150376998 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily
[TIGR03261] putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.713524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.38801 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTCT CAAAGGCCTT TCTGGGCGCC GCGACCGCCT TCCTTCTCGC ATCCACCGCC
GCCTATGCCG AAGCCGAACT TACGGTCTAC ACGTCTGTCG AGGCGGTTGA CCTCGACCGT
TACAAGGAGA CTTTCGAGAA GGCTCACCCC GACATCAAGA TCAACTGGGT CCGCGACTCG
ACAGGCGTGA TGACCGCCAA GCTACTGGCG GAGAAGGATA ATCCGCAGGC GGACGTTGTG
TGGGGCGTGG CTGCGACATC GCTGCTGCTC CTGAAGTCCG AGGGCATGCT CGAACCCTAT
GCCCCGAAGA ATGTCGAGGC CCTGGATCCG AGATTCGTCG ATGGCGACAA GCCGCCGAGC
TGGGTAGGGA TGGACGCATA TGTGGCGGCT CTCTGCTACA ACACGGTGGA GGCCGAGAAG
CTCGGCCTGA CGCCGCCAAC CAGCTGGAAG GATCTGACCA AGCCCGAATA CAAGGGTCAC
GTCGTGATGC CCAACCCCAA TTCCTCCGGA ACAGGCTTCC TCGACGTCTC CGCCTGGCTT
CAGACGTTCG GCGAAGAGGA AGCCTGGTCC TTCATGGACG CCCTGCACGA GAACATTGCC
GCCTATACCC ATTCGGGTTC CAAGCCTTGC AAGATGGCAG CGTCCGGCGA AACCGTCATC
GGCGTCTCCT TTGAGTTTCC GGGCGCCAAG GCGAAAACGT CGGGCGCGCC GATCGACATC
ATTTTTCCCG CTGAAGGATC GGGCTGGGAA GCAGAGGCCA CGGCGATCAT TGCAGGAACG
GCCAATCTCG AGGCGGCGAA AACGCTGGTC GACTGGTCGA TCAGCAAGGA AGCCAACGAG
ATGTACAATG TCGGTTATGC AGTCGTGGCT TATCCGGGAG TCGCCAAGCC GATCGAGAAT
CTTCCCGACG ACGTTGCCGA GAAGATGATC GAGAACGACT TCGAGTGGGC CGCGAACAAC
CGTGCCCGTA TTCTGAAGGA ATGGCAGAAG CGTTACGACG CAAAGTCCGA GCCCAAGTCC
TGA
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| Protein sequence | MPFSKAFLGA ATAFLLASTA AYAEAELTVY TSVEAVDLDR YKETFEKAHP DIKINWVRDS
TGVMTAKLLA EKDNPQADVV WGVAATSLLL LKSEGMLEPY APKNVEALDP RFVDGDKPPS
WVGMDAYVAA LCYNTVEAEK LGLTPPTSWK DLTKPEYKGH VVMPNPNSSG TGFLDVSAWL
QTFGEEEAWS FMDALHENIA AYTHSGSKPC KMAASGETVI GVSFEFPGAK AKTSGAPIDI
IFPAEGSGWE AEATAIIAGT ANLEAAKTLV DWSISKEANE MYNVGYAVVA YPGVAKPIEN
LPDDVAEKMI ENDFEWAANN RARILKEWQK RYDAKSEPKS
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