Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0248 |
Symbol | |
ID | 4909790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 246567 |
End bp | 248102 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640124000 |
Product | extracellular solute-binding protein |
Protein accession | YP_001055151 |
Protein GI | 126458873 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.370696 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATTGG GCCTAATAGC GGGACTAATC GCCGTTGTAG TTCTTGCACT GGTGGTCGCC TACTTTGCTA CACAGACTCC GCCAACCACT GCCACGACTA CTCCAGCTAC CACAGCCCCG CCGACCCCCA GCCCCACGAC TACAACGCCG CCGACTACTA CGCAGACGCC TACTCAGACT ACTACAACTC CGCCGAAGAC CACCACGACG CCGCCACAGA CAACAACCAC TCCGCAGCCC TCTGCGTGTA CAACTCTGGT GGTGTTAACT AGGCACCCCA CCGATATCCT AGACGCGGCG CGTACTCTTT TCCTAAAGAG CGACGTGGCG AAGAGGTATG GGGTAAAGGA CGTGGTTTTT AGGCCTGTGG CTGCTGGCCA GTGGAGGGCG ATTATCCAGG CGGGGCAGGC GGACGTGGCT TGGGGCGGGG GCCCCACCCT CTTCGACTCT CTTTACTCAG ACGGCTTGTT GTTGCCCCTT GAGGGGCCGG AGGTCAAGGC CGCCATGGCG CAGATACCGA AGACAATAGC GGGGATGCCT ATGATGAGGG TTGGGAGCGA TGGGAAGGTG TACTGGGTGG CGTGGGCCGT GTCCAGCTTC GGCATTACGA TAAACAAGAA GGTCTTGGGC AGCTACGGCC TCTCGGAGCC TAAGTCGTGG GCAGACCTCG CCTCTTTTGA GTATGGAAGA GCGGCGGCGC GTGGGGTCCC AGTGACTGGG CTGGCCAGCT TGACGCAGTC GACCAGCAAT ACTAGGATTG CTGAGATAAT TCTCCAGGCA TATGGCTGGG AGGAGGGCTG GCGTATAATC GTCTTGACGG CTGCCAACGG CAAGATTTAC GGCGGTAGCG AGGCTGTAAG AGATGGAGTA ATCGCAGGCG AAATAGGCGC CGGCTGGACA ATTGACTTCT ATGGCTACAC TGCCCAGCTT CAGAACCCAG ACACCAAGTA CGTCATCCCG CCGGACACCT CAGTCAACGG AGACCCCATA GCCGTGGTGA AGGGCACCAA GTGTAGAGAG GCCGCCGAGG CCTTCGTGGC CTGGGTGATA ACAGGTGGGC AAGTCATTGT CTTTGACCCA AAGATCAACA GAATGCCGGT GAACCCCAAC GCCTTCAACA CGCCTGAGGG CCAGAGGAGG CCCGACCTAA AGCAGGTATA CGACTACCTG CTGACGCTCA AGACCATAAA CTTCAACGAC ACCCTAGCCA TCTCCGTGGA GAACGTAGTC ATGTACTACT TCGACGCGGC GGTAAAGGAC AACCAAGACG TGTTACAACA GGCCTGGTGG AAGCTCGTCA ACGCCTACTA CAGCGGGAAG ATAGACAAGG CAACAGCCGA GGCCCTCGCC AGAGAGCTGA CAAGCCCCGT CACTTTCACA GACCCCGACA CAGGCCAGAC GGTGAAGCTC ACCCTCGACT ACGCCATGAA GATAAACGAC AAGTTGGGCA ACCCCACCTA CCGCGACAAG ATCTACTCGG CGTGGAGAGA CGCCGCGAGG AAACAGTACC AAGCAGTAAT GCAGAAAATA CCCTAG
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Protein sequence | MRLGLIAGLI AVVVLALVVA YFATQTPPTT ATTTPATTAP PTPSPTTTTP PTTTQTPTQT TTTPPKTTTT PPQTTTTPQP SACTTLVVLT RHPTDILDAA RTLFLKSDVA KRYGVKDVVF RPVAAGQWRA IIQAGQADVA WGGGPTLFDS LYSDGLLLPL EGPEVKAAMA QIPKTIAGMP MMRVGSDGKV YWVAWAVSSF GITINKKVLG SYGLSEPKSW ADLASFEYGR AAARGVPVTG LASLTQSTSN TRIAEIILQA YGWEEGWRII VLTAANGKIY GGSEAVRDGV IAGEIGAGWT IDFYGYTAQL QNPDTKYVIP PDTSVNGDPI AVVKGTKCRE AAEAFVAWVI TGGQVIVFDP KINRMPVNPN AFNTPEGQRR PDLKQVYDYL LTLKTINFND TLAISVENVV MYYFDAAVKD NQDVLQQAWW KLVNAYYSGK IDKATAEALA RELTSPVTFT DPDTGQTVKL TLDYAMKIND KLGNPTYRDK IYSAWRDAAR KQYQAVMQKI P
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