| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1948 |
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| Symbol | |
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| ID | 5322807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2002028 |
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| End bp | 2003008 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640790886 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001327617 |
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| Protein GI | 150397150 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.113804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.383853 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGC TTCTCCCTGC CGTCGCCGCA GCGCTCGTCG CCGGCCTCCT GTCCACTGCC
GCTCTCGCCG AAAGCCTCGT GCTTTATACC AGTCAGCCGA ACGAGGACGC GCAGGCGACG
GTGGATGCAT TCGAGGCGGC CAACCCCGGC GTCGAGGTGG AATGGGTGCG GGAGGGAACA
ACAAAAATCA TGGCTAAGCT GATGGCCGAG ATCGAGGCGG GCAACCCCGT GGCGGATGTG
CTTCTGATCG CCGATACGGT GACGATGCAG CGGTTGAAGG AGGCGGGCCA GCTGATGCCT
TACAAATCTC CGGAAGCCTC AGCTTTCGAG GCCTCTCTCT TCGACCCGGA CGGCACCTAT
TATTCGACGA AGATGATCAC CACCGGGATC ATCTACAACA CTTCCGCCGC GATGAAGCCG
GCCGGCTGGG AGGATCTTGC GAAACCCGAG GCCAAGGGGC TCGTCACCAT GCCCAGCCCG
CTCACGTCAG GCGCGGCGCT GATCCATGCC CAGACGCTTG CCGGCATCGG TGCGCTCGGT
TGGGACTACT ACGAGGCGCT CGCGGAAAAC GGCGCGACGG CCGCCGGCGG CAATGGCGGC
GTGTTGAAGT CCGTCGCAAC GGGCGAGAAG GCCTATGGGA TGGTGGTGGA TTTCATGGCG
ATCCGCGAGA AGGCAAAGGG CGCGCCGGTG GAGTTCGTCT TTCCGGCGGA GGGCGTTTCG
GCCGTTACCG AGCCGGTCGC CATCCTGAGA ACCGCAAAAA ACCCGGATGC AGCAAAGAAA
TTCGTCGATT TCCTCCTTTC GGAAGAGGGG CAGCAGGTGG CAGTGACGAT GGGCTACATT
CCGGCCCGCA ACGGGCTTGC CTTGCCCGAG GGATTTCCCG CCCGCGAGGT TGTTAAGGTG
CTGCCGGTCG ACGCCGCCGC AGCCGTGAAG AATTCCGACG CGGATCTGAA AACCTTCTCG
GGGATTTTCG GCACCAACTG A
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| Protein sequence | MKTLLPAVAA ALVAGLLSTA ALAESLVLYT SQPNEDAQAT VDAFEAANPG VEVEWVREGT
TKIMAKLMAE IEAGNPVADV LLIADTVTMQ RLKEAGQLMP YKSPEASAFE ASLFDPDGTY
YSTKMITTGI IYNTSAAMKP AGWEDLAKPE AKGLVTMPSP LTSGAALIHA QTLAGIGALG
WDYYEALAEN GATAAGGNGG VLKSVATGEK AYGMVVDFMA IREKAKGAPV EFVFPAEGVS
AVTEPVAILR TAKNPDAAKK FVDFLLSEEG QQVAVTMGYI PARNGLALPE GFPAREVVKV
LPVDAAAAVK NSDADLKTFS GIFGTN
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