| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2899 |
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| Symbol | |
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| ID | 4458761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3576837 |
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| End bp | 3577874 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639703673 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_847011 |
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| Protein GI | 116750324 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily
[TIGR03261] putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00994055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCCGGCT ATGGAAAACA CGTCAGACTC ATCGCTGCAA CGCTTGCGGT ATTTGCCGCC
GCGCTCGTCG CTCCATTTGC GCACGCCGAA GACCTCGTCG TCTACACGGC CCTTGAAGAC
GACGAATACC CTGCATACCT GGAACTCTTC AAGAAGGCGC ATCCGGATGT TAACGTGAAA
ATCGTCAGGG ATTCCACCGG TATTGTCACA GCCAAACTGA TGGCCGAAAA AGACAATCCT
CAGGCGGACG TGATCTGGGG CGTGGCGGCC ACGAGCCTCC TGGTCTGCGA TGCGGCGGGG
ATGCTGCAAG GATACGCCCC CGGGGATGTC GATAAAGTGA ATCCGAGTAT GAAAGACTCA
TCCGCACCTC CCCGCTGGGT TGGGATAAAG GCATGGGAAA CGGGCTTTTG CGTGAATACC
GTGGAAGCGA AATCGCAGAA TCTGCCGATT CCGAAATCCC TCGCCGACCT GGCAAAGCCC
TTGTACAAAG GTAAAATCGT CATGCCCAAC CCGGCGTCTT CCGGCACGGG TTTCCTTACC
GTCTCGGCGA TTCTGCAGAT GATGGGCGAG AGGCAGGGCT GGGAATACCT GGACAAATTG
CACGAGAACA TCGCGCAATA CACGCATTCC GGTTCCAAGC CCTGCAAGAT GGCCGGGGCG
GGTGAGTACC CCATCGGTAT TTCGTTCGGC TACCGCGGCA TCATCCAAAA GAAAAAGGGT
GAACCTGTTG AAACGGTCTT CCCGAGCGAA GGCTGCGGCT GGGACGTCGA AGCCAACGCT
CTCGTGAAAA AGACTCCGGT CAAGGAATCC GCGAAGAAAT TCCTGGATTG GGCTCTGAGC
CCTGAAGTGA TGAAGATGTA CGCCAGGGTC TATCCCGTTA CGGCATATCC GACCGGGGAG
CCGGTTCCCG AGGGATATCC GTCCGATCCG TTCAAGCAGC TTGTGAAAAA CGACCTTGCG
TGGGCGGCGA AAAATCGAGA CGCCATACTG ACGGAATGGA CCAGGCGATA CGACGGCAAA
AGCGAAGCCC GAAAGTAA
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| Protein sequence | MPGYGKHVRL IAATLAVFAA ALVAPFAHAE DLVVYTALED DEYPAYLELF KKAHPDVNVK
IVRDSTGIVT AKLMAEKDNP QADVIWGVAA TSLLVCDAAG MLQGYAPGDV DKVNPSMKDS
SAPPRWVGIK AWETGFCVNT VEAKSQNLPI PKSLADLAKP LYKGKIVMPN PASSGTGFLT
VSAILQMMGE RQGWEYLDKL HENIAQYTHS GSKPCKMAGA GEYPIGISFG YRGIIQKKKG
EPVETVFPSE GCGWDVEANA LVKKTPVKES AKKFLDWALS PEVMKMYARV YPVTAYPTGE
PVPEGYPSDP FKQLVKNDLA WAAKNRDAIL TEWTRRYDGK SEARK
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