152 homologs were found in PanDaTox collection
for query gene Avin_52130 on replicon NC_012560
Organism: Azotobacter vinelandii DJ



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012560  Avin_52130  periplasmic binding protein  100 
 
 
388 aa  777    Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1990  putative regulatory lipoprotein  47.76 
 
 
419 aa  284  2.0000000000000002e-75  Methylobacillus flagellatus KT  Bacteria  normal  0.307134  normal 
 
 
-
 
NC_010581  Bind_2968  extracellular solute-binding protein  45.11 
 
 
445 aa  257  2e-67  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.812096 
 
 
-
 
NC_010002  Daci_4801  extracellular solute-binding protein  32.38 
 
 
442 aa  195  1e-48  Delftia acidovorans SPH-1  Bacteria  normal  0.433474  normal 
 
 
-
 
NC_008688  Pden_4658  extracellular solute-binding protein  29.7 
 
 
440 aa  184  3e-45  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008698  Tpen_1808  extracellular solute-binding protein  27.55 
 
 
514 aa  121  1.9999999999999998e-26  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_008688  Pden_4655  putative regulatory lipoprotein  32.32 
 
 
395 aa  119  7e-26  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3241  phosphoglycerate transport regulatory protein PgtC, putative  27.06 
 
 
419 aa  118  1.9999999999999998e-25  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.560629 
 
 
-
 
NC_008321  Shewmr4_2683  putative phosphoglycerate transport regulatory protein PgtC  24.05 
 
 
437 aa  116  7.999999999999999e-25  Shewanella sp. MR-4  Bacteria  normal  0.322745  normal  0.30829 
 
 
-
 
NC_008322  Shewmr7_2751  putative phosphoglycerate transport regulatory protein PgtC  24.11 
 
 
437 aa  114  4.0000000000000004e-24  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_3495  extracellular solute-binding protein  27.18 
 
 
375 aa  105  1e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.0500866  normal  0.246878 
 
 
-
 
NC_009376  Pars_1168  extracellular solute-binding protein  24.35 
 
 
516 aa  100  4e-20  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  0.731614  normal  0.0353149 
 
 
-
 
NC_011080  SNSL254_A2587  phosphoglycerate transport: protein for signal transmission  26.13 
 
 
436 aa  100  5e-20  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.259528  normal 
 
 
-
 
NC_011149  SeAg_B2539  phosphoglycerate transport: protein for signal transmission  26.13 
 
 
436 aa  100  5e-20  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2628  phosphoglycerate transport: protein for signal transmission  26.13 
 
 
436 aa  100  6e-20  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C2651  phosphoglycerate transport: protein for signal transmission  26.13 
 
 
407 aa  99.8  7e-20  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.0959912  hitchhiker  0.000467532 
 
 
-
 
NC_008701  Pisl_0075  extracellular solute-binding protein  24.16 
 
 
498 aa  96.3  8e-19  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.735503  normal 
 
 
-
 
NC_011769  DvMF_1586  extracellular solute-binding protein family 1  27.24 
 
 
333 aa  94.4  3e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009073  Pcal_0248  extracellular solute-binding protein  25.32 
 
 
511 aa  93.6  5e-18  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.370696 
 
 
-
 
NC_010525  Tneu_1007  extracellular solute-binding protein  23.76 
 
 
485 aa  93.2  7e-18  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.256846  decreased coverage  0.000168852 
 
 
-
 
NC_009620  Smed_4877  extracellular solute-binding protein  25.19 
 
 
340 aa  91.3  3e-17  Sinorhizobium medicae WSM419  Bacteria  normal  0.713524  normal  0.38801 
 
 
-
 
NC_010525  Tneu_0944  hypothetical protein  28.71 
 
 
472 aa  89.7  8e-17  Thermoproteus neutrophilus V24Sta  Archaea  normal  decreased coverage  0.0000501517 
 
 
-
 
NC_008686  Pden_1078  extracellular solute-binding protein  31.35 
 
 
322 aa  89.4  9e-17  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3231  extracellular solute-binding protein family 1  29.63 
 
 
325 aa  88.6  2e-16  Dickeya dadantii Ech703  Bacteria  normal  0.416701  n/a   
 
 
-
 
NC_008044  TM1040_0544  extracellular solute-binding protein  28.46 
 
 
322 aa  85.5  0.000000000000001  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009073  Pcal_0650  hypothetical protein  24.11 
 
 
467 aa  84  0.000000000000004  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_009636  Smed_1948  extracellular solute-binding protein  28.95 
 
 
326 aa  82.8  0.00000000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.113804  normal  0.383853 
 
 
-
 
NC_008698  Tpen_1485  extracellular solute-binding protein  24.25 
 
 
470 aa  80.5  0.00000000000004  Thermofilum pendens Hrk 5  Archaea  normal  0.0472403  n/a   
 
 
-
 
NC_007643  Rru_A3199  extracellular solute-binding protein  30.93 
 
 
338 aa  79.7  0.00000000000007  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.680045  n/a   
 
 
-
 
NC_013946  Mrub_1201  extracellular solute-binding protein family 1  25.61 
 
 
320 aa  78.6  0.0000000000002  Meiothermus ruber DSM 1279  Bacteria  normal  0.941139  normal  0.523727 
 
 
-
 
NC_010002  Daci_1282  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  24.9 
 
 
347 aa  79  0.0000000000002  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2736  extracellular solute-binding protein family 1  27.78 
 
 
325 aa  77.4  0.0000000000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.288744  normal 
 
 
-
 
NC_007510  Bcep18194_A6494  ABC Fe3+ siderophore transporter, periplasmic ligand binding protein  25.78 
 
 
351 aa  76.6  0.0000000000006  Burkholderia sp. 383  Bacteria  decreased coverage  0.000128013  normal  0.750448 
 
 
-
 
NC_009456  VC0395_0644  putative phosphoglycerate transport regulatory protein PgtC  24.36 
 
 
440 aa  77  0.0000000000006  Vibrio cholerae O395  Bacteria  normal  0.788627  n/a   
 
 
-
 
NC_012857  Rpic12D_4607  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  24.18 
 
 
341 aa  75.1  0.000000000002  Ralstonia pickettii 12D  Bacteria  normal  0.980284  normal 
 
 
-
 
NC_010678  Rpic_4473  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  24.18 
 
 
341 aa  75.1  0.000000000002  Ralstonia pickettii 12J  Bacteria  normal  normal  0.144148 
 
 
-
 
NC_009654  Mmwyl1_0120  extracellular solute-binding protein  27.21 
 
 
340 aa  74.7  0.000000000002  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_3135  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  26.09 
 
 
351 aa  75.1  0.000000000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.0000124491 
 
 
-
 
NC_008701  Pisl_0028  hypothetical protein  31.6 
 
 
470 aa  74.3  0.000000000003  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal 
 
 
-
 
NC_010322  PputGB1_5188  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  24.91 
 
 
341 aa  74.7  0.000000000003  Pseudomonas putida GB-1  Bacteria  normal  0.491174  normal 
 
 
-
 
NC_007492  Pfl01_5367  extracellular solute-binding protein  24.21 
 
 
341 aa  73.6  0.000000000006  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009376  Pars_1070  hypothetical protein  26.79 
 
 
475 aa  73.2  0.000000000007  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal 
 
 
-
 
NC_009512  Pput_5008  extracellular solute-binding protein  24.56 
 
 
341 aa  73.2  0.000000000008  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_1463  extracellular solute-binding protein  26.62 
 
 
326 aa  73.2  0.000000000008  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.512158  n/a   
 
 
-
 
NC_002947  PP_5135  ABC transporter, periplasmic binding protein  24.21 
 
 
341 aa  71.2  0.00000000003  Pseudomonas putida KT2440  Bacteria  normal  0.659918  normal 
 
 
-
 
NC_008346  Swol_2479  ABC transporter, periplasmic substrate-binding protein  27.46 
 
 
347 aa  71.2  0.00000000003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_3159  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  25 
 
 
351 aa  70.1  0.00000000006  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.451295  normal  0.0280644 
 
 
-
 
NC_007348  Reut_B5874  extracellular solute-binding protein  25 
 
 
341 aa  70.1  0.00000000007  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_04090  ABC-type Fe3+ transport system, periplasmic component  31.44 
 
 
367 aa  70.1  0.00000000007  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal  0.510256 
 
 
-
 
NC_010501  PputW619_0330  2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component  24.21 
 
 
341 aa  69.7  0.00000000009  Pseudomonas putida W619  Bacteria  normal  normal  0.631264 
 
 
-
 
NC_002967  TDE0386  ABC transporter, periplasmic substrate-binding protein  25.4 
 
 
338 aa  68.9  0.0000000001  Treponema denticola ATCC 35405  Bacteria  decreased coverage  0.00000551212  n/a   
 
 
-
 
NC_009073  Pcal_0214  ABC transporter periplasmic-binding protein  30.68 
 
 
337 aa  67.8  0.0000000003  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.308816 
 
 
-
 
NC_011369  Rleg2_2481  extracellular solute-binding protein family 1  25.93 
 
 
330 aa  68.2  0.0000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.37214  normal  0.635435 
 
 
-
 
NC_010184  BcerKBAB4_1611  extracellular solute-binding protein  26.78 
 
 
341 aa  67.4  0.0000000004  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.257155  n/a   
 
 
-
 
NC_013171  Apre_0051  extracellular solute-binding protein family 1  26.51 
 
 
378 aa  67  0.0000000005  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.115612  n/a   
 
 
-
 
NC_012917  PC1_1545  extracellular solute-binding protein family 1  25.91 
 
 
339 aa  67  0.0000000005  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.061269  n/a   
 
 
-
 
NC_011773  BCAH820_1786  putative ABC transporter, substrate-binding protein  26.78 
 
 
341 aa  66.6  0.0000000006  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS1611  ABC transporter substrate-binding protein  26.78 
 
 
341 aa  67  0.0000000006  Bacillus anthracis str. Sterne  Bacteria  normal  0.791321  n/a   
 
 
-
 
NC_005957  BT9727_1572  ABC transporter, substrate-binding protein  26.78 
 
 
341 aa  67  0.0000000006  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1563  ABC transporter, substrate-binding protein  26.78 
 
 
341 aa  67  0.0000000006  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1735  ABC transporter substrate-binding protein  26.78 
 
 
341 aa  67  0.0000000006  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.313912  n/a   
 
 
-
 
NC_011725  BCB4264_A1753  putative ABC transporter, substrate-binding protein  26.78 
 
 
341 aa  67  0.0000000006  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1866  putative ABC transporter, substrate-binding protein  26.78 
 
 
341 aa  66.6  0.0000000006  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0970  extracellular solute-binding protein  21.48 
 
 
340 aa  66.6  0.0000000008  Verminephrobacter eiseniae EF01-2  Bacteria  decreased coverage  0.00000273849  normal 
 
 
-
 
NC_013421  Pecwa_2917  extracellular solute-binding protein family 1  26.32 
 
 
339 aa  65.9  0.000000001  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3590  putative ABC transporter, substrate-binding protein  26.78 
 
 
341 aa  65.9  0.000000001  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_008309  HS_0643  Fe3+ ABC transporter, iron-binding protein  29.34 
 
 
346 aa  65.9  0.000000001  Haemophilus somnus 129PT  Bacteria  hitchhiker  0.000121089  n/a   
 
 
-
 
NC_003909  BCE_1812  ABC transporter, substrate-binding protein, putative  25.68 
 
 
341 aa  65.5  0.000000002  Bacillus cereus ATCC 10987  Bacteria  normal  0.98446  n/a   
 
 
-
 
NC_007348  Reut_B5525  extracellular solute-binding protein  23.53 
 
 
340 aa  65.5  0.000000002  Ralstonia eutropha JMP134  Bacteria  normal  0.655164  n/a   
 
 
-
 
NC_008346  Swol_2476  ABC-type iron(III)-binding periplasmic protein precursor  28.57 
 
 
364 aa  65.1  0.000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.00000339151  n/a   
 
 
-
 
NC_009637  MmarC7_1107  extracellular solute-binding protein  27.84 
 
 
343 aa  62.4  0.00000001  Methanococcus maripaludis C7  Archaea  normal  0.695758  normal 
 
 
-
 
NC_008554  Sfum_2899  extracellular solute-binding protein  22.26 
 
 
345 aa  62  0.00000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  decreased coverage  0.00994055 
 
 
-
 
NC_008701  Pisl_1958  ABC transporter periplasmic-binding protein  28.41 
 
 
338 aa  60.5  0.00000005  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.0213047  hitchhiker  1.86869e-16 
 
 
-
 
NC_009674  Bcer98_1048  extracellular solute-binding protein  24.54 
 
 
356 aa  60.5  0.00000005  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1436  iron compound ABC transporter, iron compound-binding protein, putative  21.84 
 
 
346 aa  60.1  0.00000006  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1235  iron compound ABC transporter iron compound-binding protein  21.84 
 
 
358 aa  60.1  0.00000007  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1212  iron ABC transporter solute-binding protein  21.84 
 
 
358 aa  60.1  0.00000007  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1214  iron ABC transporter solute-binding protein  21.84 
 
 
358 aa  60.1  0.00000007  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1337  iron compound ABC transporter iron compound-binding protein  21.84 
 
 
358 aa  60.1  0.00000007  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3970  putative iron compound ABC transporter, iron compound-binding protein  23.21 
 
 
358 aa  60.1  0.00000007  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0545  ABC transporter, periplasmic substrate-binding protein  21.66 
 
 
339 aa  60.1  0.00000007  Vibrio cholerae O395  Bacteria  hitchhiker  0.001131  n/a   
 
 
-
 
NC_011773  BCAH820_1411  putative iron compound ABC transporter, iron compound-binding protein  21.84 
 
 
358 aa  60.1  0.00000007  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011658  BCAH187_A1476  putative iron compound ABC transporter, iron compound-binding protein  23.21 
 
 
358 aa  59.7  0.00000008  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000766  ABC transporter, periplasmic substrate-binding protein  20.97 
 
 
336 aa  59.7  0.00000009  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0625  iron(III) ABC transporter, periplasmic iron-compound-binding protein  29.19 
 
 
344 aa  59.7  0.00000009  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009135  MmarC5_1570  extracellular solute-binding protein  27.27 
 
 
350 aa  59.3  0.0000001  Methanococcus maripaludis C5  Archaea  normal  0.840173  n/a   
 
 
-
 
NC_009376  Pars_2140  ABC transporter periplasmic-binding protein  27.27 
 
 
338 aa  59.3  0.0000001  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal 
 
 
-
 
NC_012917  PC1_1221  extracellular solute-binding protein family 1  23.08 
 
 
326 aa  58.9  0.0000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.141693  n/a   
 
 
-
 
NC_009635  Maeo_0333  extracellular solute-binding protein  27.53 
 
 
344 aa  58.9  0.0000001  Methanococcus aeolicus Nankai-3  Archaea  normal  0.853179  n/a   
 
 
-
 
NC_009784  VIBHAR_04877  ABC-type Fe3+ transport system periplasmic component  21.35 
 
 
336 aa  59.3  0.0000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010184  BcerKBAB4_1237  extracellular metal-binding protein  22.61 
 
 
358 aa  59.7  0.0000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010525  Tneu_1089  ABC transporter periplasmic-binding protein  27.27 
 
 
338 aa  58.5  0.0000002  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.167186  normal  0.0159055 
 
 
-
 
NC_008709  Ping_2746  ABC transporter periplasmic substrate-binding protein  22.68 
 
 
335 aa  57.8  0.0000003  Psychromonas ingrahamii 37  Bacteria  normal  0.553799  normal 
 
 
-
 
NC_009436  Ent638_2070  extracellular solute-binding protein  25.82 
 
 
322 aa  57.8  0.0000003  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_3281  extracellular solute-binding protein  25 
 
 
343 aa  58.2  0.0000003  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_3115  extracellular solute-binding protein  23.46 
 
 
342 aa  57.4  0.0000004  Serratia proteamaculans 568  Bacteria  normal  0.0701659  normal 
 
 
-
 
NC_011725  BCB4264_A1374  putative iron compound ABC transporter, iron compound-binding protein  21.46 
 
 
358 aa  56.6  0.0000006  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2518  bacterial extracellular solute-binding domain protein  28.72 
 
 
350 aa  55.8  0.000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.27383  n/a   
 
 
-
 
NC_008309  HS_0641  Fe3+ ABC transporter, iron-binding protein  26.67 
 
 
343 aa  55.8  0.000001  Haemophilus somnus 129PT  Bacteria  normal  0.147653  n/a   
 
 
-
 
NC_009718  Fnod_1638  iron ABC transporter substrate-binding protein  23.3 
 
 
266 aa  55.8  0.000001  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
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