Gene Pcal_0650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0650 
Symbol 
ID4908855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp613941 
End bp615344 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content59% 
IMG OID640124399 
Producthypothetical protein 
Protein accessionYP_001055542 
Protein GI126459264 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTTT TGGCGGCGGT CCTACTGCTG GCAATAGCAG CTTTTTCCGT CACAATTGTA 
ACAAGGGCCG ACCAAGCCTC AATTGACAGA GCGTTGCCAG TGCTACAGCG GTATTTCCCC
GATGTGAAAA TAGTACCGGC GGACCCCACC CAGTGGAGGG CCCTTATTGA CCGAGGGGGC
GTGGACTTCC TGTGGGCAGG CGCGCCGGTT TTATACGAGG TTTTACTGAA GGAGGGGCGG
CTGGCGCCTA TGCCCAATGT CCCCGAGCTA CAAGCGTTGC CGGACAAGGT GGGCAACATA
CCGCTCAAGA GGGTGGTAAA CGGTAGCGTG TACTACGTGG TATACGGCTT GTTGGGCTAC
GTAATTGGCT ACAACCAGGA GGCGCTCAAG AGGGCCGGCT TAGAGCCTGT GTGTAGCTGG
AGCGGCTTCT CCTCTCCCAA GCTTGTCCAA TACTACCTCC AGACAGGGAG CCGCCCCGTG
GCCTTGGCGA AGCCCACTAA GTCTACCTCG ACTGCGGCTA TGATGCAGCT TGTGACAGAG
ATATACGGGT GGGAGGAGGG CTGGCGCTAC CTAACGGCGA TGGCGGCTGT GGCTAGGTTT
GTGGACTCCA GCGGCGCCGT GCGCGACGCC GTGAAGCGAG GAGAGGCCCT CTTCGGCCCC
ATGGTGGACT ACTATGTCTT CATCGCGGGG CTGGGCTACT GTGTGCCAGA GGACGGCACA
GACATACTGT TTGACCCAAT TGCGGTCCCC AAGGGCGCCA ACATGACCGC GGCGGCTGTT
TTGACAAGAG TCTTTCTCAC AGACATTGAG AAGACTCTTG TAGATCGCTA CATAATCCCC
GGCAACCCCG CCGTGTTAGA CTCTCCAGAT GTAAATCAGA CAAAGGCGGC GGTGTTAAAG
AGGCACCTAG AGTTGCTTAA GTCGAAGGTA AAGGCTGTGC CGCCTGAAAA GTCGGCTTCG
TTCTACTACT CCTTCATCTA CTACTACGAG GCCACCCTAG TTGACTTGCA AGACGTCTTA
ACAGACGTGT GGACGAAGGT GGTTAAGGCG TACCTCGCCG GCAACATCAC GCGGCAGCAG
TTCGAAGAGC TGTTGAGTCT CCTCGCCGCG CCGGTCAACT TCACAGACCC AGCCACGGGG
GAGCGGCTCA AGTTTACATA CGACGTAGCG GTGAAGCTCA ATGACAAGGT GGGGTCAGAC
CCCACTTACA GAGACCTAGT GTATCAAGCC TGGAGAGAAG CCGCCAGGGC CAAGTACAGA
GAGGTAGAAC GCCGGCTCGA GAGCTACCTC GCCTCCAAGC CCGCCGGCGG GGCCCCCTCG
GCCGCCTTGC TCACGGCCGC CGCGGTCGGC GCCTTTGCAG TTGCAGTGGG GGCTTACCTA
CTAATGAGGC GGAGGGCGGG CTAG
 
Protein sequence
MRLLAAVLLL AIAAFSVTIV TRADQASIDR ALPVLQRYFP DVKIVPADPT QWRALIDRGG 
VDFLWAGAPV LYEVLLKEGR LAPMPNVPEL QALPDKVGNI PLKRVVNGSV YYVVYGLLGY
VIGYNQEALK RAGLEPVCSW SGFSSPKLVQ YYLQTGSRPV ALAKPTKSTS TAAMMQLVTE
IYGWEEGWRY LTAMAAVARF VDSSGAVRDA VKRGEALFGP MVDYYVFIAG LGYCVPEDGT
DILFDPIAVP KGANMTAAAV LTRVFLTDIE KTLVDRYIIP GNPAVLDSPD VNQTKAAVLK
RHLELLKSKV KAVPPEKSAS FYYSFIYYYE ATLVDLQDVL TDVWTKVVKA YLAGNITRQQ
FEELLSLLAA PVNFTDPATG ERLKFTYDVA VKLNDKVGSD PTYRDLVYQA WREAARAKYR
EVERRLESYL ASKPAGGAPS AALLTAAAVG AFAVAVGAYL LMRRRAG