Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0650 |
Symbol | |
ID | 4908855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 613941 |
End bp | 615344 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640124399 |
Product | hypothetical protein |
Protein accession | YP_001055542 |
Protein GI | 126459264 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTTT TGGCGGCGGT CCTACTGCTG GCAATAGCAG CTTTTTCCGT CACAATTGTA ACAAGGGCCG ACCAAGCCTC AATTGACAGA GCGTTGCCAG TGCTACAGCG GTATTTCCCC GATGTGAAAA TAGTACCGGC GGACCCCACC CAGTGGAGGG CCCTTATTGA CCGAGGGGGC GTGGACTTCC TGTGGGCAGG CGCGCCGGTT TTATACGAGG TTTTACTGAA GGAGGGGCGG CTGGCGCCTA TGCCCAATGT CCCCGAGCTA CAAGCGTTGC CGGACAAGGT GGGCAACATA CCGCTCAAGA GGGTGGTAAA CGGTAGCGTG TACTACGTGG TATACGGCTT GTTGGGCTAC GTAATTGGCT ACAACCAGGA GGCGCTCAAG AGGGCCGGCT TAGAGCCTGT GTGTAGCTGG AGCGGCTTCT CCTCTCCCAA GCTTGTCCAA TACTACCTCC AGACAGGGAG CCGCCCCGTG GCCTTGGCGA AGCCCACTAA GTCTACCTCG ACTGCGGCTA TGATGCAGCT TGTGACAGAG ATATACGGGT GGGAGGAGGG CTGGCGCTAC CTAACGGCGA TGGCGGCTGT GGCTAGGTTT GTGGACTCCA GCGGCGCCGT GCGCGACGCC GTGAAGCGAG GAGAGGCCCT CTTCGGCCCC ATGGTGGACT ACTATGTCTT CATCGCGGGG CTGGGCTACT GTGTGCCAGA GGACGGCACA GACATACTGT TTGACCCAAT TGCGGTCCCC AAGGGCGCCA ACATGACCGC GGCGGCTGTT TTGACAAGAG TCTTTCTCAC AGACATTGAG AAGACTCTTG TAGATCGCTA CATAATCCCC GGCAACCCCG CCGTGTTAGA CTCTCCAGAT GTAAATCAGA CAAAGGCGGC GGTGTTAAAG AGGCACCTAG AGTTGCTTAA GTCGAAGGTA AAGGCTGTGC CGCCTGAAAA GTCGGCTTCG TTCTACTACT CCTTCATCTA CTACTACGAG GCCACCCTAG TTGACTTGCA AGACGTCTTA ACAGACGTGT GGACGAAGGT GGTTAAGGCG TACCTCGCCG GCAACATCAC GCGGCAGCAG TTCGAAGAGC TGTTGAGTCT CCTCGCCGCG CCGGTCAACT TCACAGACCC AGCCACGGGG GAGCGGCTCA AGTTTACATA CGACGTAGCG GTGAAGCTCA ATGACAAGGT GGGGTCAGAC CCCACTTACA GAGACCTAGT GTATCAAGCC TGGAGAGAAG CCGCCAGGGC CAAGTACAGA GAGGTAGAAC GCCGGCTCGA GAGCTACCTC GCCTCCAAGC CCGCCGGCGG GGCCCCCTCG GCCGCCTTGC TCACGGCCGC CGCGGTCGGC GCCTTTGCAG TTGCAGTGGG GGCTTACCTA CTAATGAGGC GGAGGGCGGG CTAG
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Protein sequence | MRLLAAVLLL AIAAFSVTIV TRADQASIDR ALPVLQRYFP DVKIVPADPT QWRALIDRGG VDFLWAGAPV LYEVLLKEGR LAPMPNVPEL QALPDKVGNI PLKRVVNGSV YYVVYGLLGY VIGYNQEALK RAGLEPVCSW SGFSSPKLVQ YYLQTGSRPV ALAKPTKSTS TAAMMQLVTE IYGWEEGWRY LTAMAAVARF VDSSGAVRDA VKRGEALFGP MVDYYVFIAG LGYCVPEDGT DILFDPIAVP KGANMTAAAV LTRVFLTDIE KTLVDRYIIP GNPAVLDSPD VNQTKAAVLK RHLELLKSKV KAVPPEKSAS FYYSFIYYYE ATLVDLQDVL TDVWTKVVKA YLAGNITRQQ FEELLSLLAA PVNFTDPATG ERLKFTYDVA VKLNDKVGSD PTYRDLVYQA WREAARAKYR EVERRLESYL ASKPAGGAPS AALLTAAAVG AFAVAVGAYL LMRRRAG
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