More than 300 homologs were found in PanDaTox collection
for query gene Amir_2985 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_2985  binding-protein-dependent transport systems inner membrane component  100 
 
 
270 aa  529  1e-149  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1245  binding-protein-dependent transport systems inner membrane component  62.69 
 
 
287 aa  363  2e-99  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.544041  n/a   
 
 
-
 
NC_014165  Tbis_2413  binding-protein-dependent transporter inner membrane component  68.28 
 
 
277 aa  361  8e-99  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2785  binding-protein-dependent transport systems inner membrane component  60.67 
 
 
296 aa  344  7e-94  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.391762  normal 
 
 
-
 
NC_013235  Namu_0186  binding-protein-dependent transport systems inner membrane component  58.96 
 
 
304 aa  327  1.0000000000000001e-88  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6969  binding-protein-dependent transport systems inner membrane component  60.96 
 
 
303 aa  320  9.999999999999999e-87  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0400513  normal 
 
 
-
 
NC_013172  Bfae_01500  carbohydrate ABC transporter membrane protein  55.97 
 
 
315 aa  287  1e-76  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011881  Achl_4614  binding-protein-dependent transport systems inner membrane component  51.98 
 
 
296 aa  271  6e-72  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008148  Rxyl_0623  binding-protein-dependent transport systems inner membrane component  35.45 
 
 
285 aa  162  4.0000000000000004e-39  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.587185  n/a   
 
 
-
 
NC_013739  Cwoe_4452  binding-protein-dependent transport systems inner membrane component  33.71 
 
 
274 aa  157  2e-37  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1289  binding-protein-dependent transport systems inner membrane component  32.81 
 
 
271 aa  152  7e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_5439  binding-protein-dependent transport systems inner membrane component  31.48 
 
 
272 aa  150  3e-35  Conexibacter woesei DSM 14684  Bacteria  normal  0.691915  normal 
 
 
-
 
NC_013172  Bfae_00860  ABC-type sugar transport system, permease component  36.17 
 
 
267 aa  149  4e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4664  binding-protein-dependent transport systems inner membrane component  32.12 
 
 
294 aa  149  5e-35  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.829969 
 
 
-
 
NC_012848  Rleg_4749  binding-protein-dependent transport systems inner membrane component  31.39 
 
 
294 aa  143  3e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.377096 
 
 
-
 
NC_013739  Cwoe_3981  binding-protein-dependent transport systems inner membrane component  32.06 
 
 
274 aa  139  3.9999999999999997e-32  Conexibacter woesei DSM 14684  Bacteria  normal  0.270796  normal 
 
 
-
 
NC_013946  Mrub_2088  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
282 aa  139  6e-32  Meiothermus ruber DSM 1279  Bacteria  hitchhiker  0.00655693  normal  0.897951 
 
 
-
 
NC_012850  Rleg_1308  binding-protein-dependent transport systems inner membrane component  31.32 
 
 
277 aa  137  2e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1103  binding-protein-dependent transporter inner membrane component  34.85 
 
 
283 aa  137  3.0000000000000003e-31  Thermobispora bispora DSM 43833  Bacteria  normal  0.216355  normal  0.105298 
 
 
-
 
NC_013739  Cwoe_4423  binding-protein-dependent transport systems inner membrane component  36.06 
 
 
279 aa  136  4e-31  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.389703 
 
 
-
 
NC_014151  Cfla_3363  binding-protein-dependent transport systems inner membrane component  31.84 
 
 
274 aa  135  5e-31  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.364527  hitchhiker  0.005111 
 
 
-
 
NC_007802  Jann_3836  binding-protein-dependent transport systems inner membrane component  31.66 
 
 
283 aa  135  6.0000000000000005e-31  Jannaschia sp. CCS1  Bacteria  normal  0.253658  normal 
 
 
-
 
NC_008578  Acel_1362  binding-protein-dependent transport systems inner membrane component  32.72 
 
 
274 aa  135  6.0000000000000005e-31  Acidothermus cellulolyticus 11B  Bacteria  normal  0.159934  normal  0.110996 
 
 
-
 
NC_008709  Ping_2009  ABC sugar transporter inner membrane binding protein  32.68 
 
 
283 aa  135  7.000000000000001e-31  Psychromonas ingrahamii 37  Bacteria  normal  0.815195  normal 
 
 
-
 
NC_009636  Smed_2422  binding-protein-dependent transport systems inner membrane component  32.6 
 
 
277 aa  135  8e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.161716 
 
 
-
 
NC_013595  Sros_3073  sugar ABC transporter permease  30.26 
 
 
277 aa  134  1.9999999999999998e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.146884 
 
 
-
 
NC_011899  Hore_13120  binding-protein-dependent transport systems inner membrane component  28.46 
 
 
281 aa  132  3.9999999999999996e-30  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1418  binding-protein-dependent transport systems inner membrane component  32.67 
 
 
276 aa  131  9e-30  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0352  binding-protein-dependent transport systems inner membrane component  31.28 
 
 
277 aa  132  9e-30  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2735  binding-protein-dependent transport systems inner membrane component  29.62 
 
 
268 aa  131  1.0000000000000001e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.146401  normal  0.117975 
 
 
-
 
NC_011884  Cyan7425_4398  Monosaccharide-transporting ATPase  33.2 
 
 
281 aa  131  1.0000000000000001e-29  Cyanothece sp. PCC 7425  Bacteria  hitchhiker  0.000709548  normal  0.804646 
 
 
-
 
NC_008541  Arth_3141  binding-protein-dependent transport systems inner membrane component  33.93 
 
 
300 aa  131  1.0000000000000001e-29  Arthrobacter sp. FB24  Bacteria  normal  0.522421  n/a   
 
 
-
 
NC_011369  Rleg2_1220  binding-protein-dependent transport systems inner membrane component  31.7 
 
 
276 aa  130  2.0000000000000002e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_4035  binding-protein-dependent transport systems inner membrane component  23.44 
 
 
275 aa  130  2.0000000000000002e-29  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0827  binding-protein-dependent transport systems inner membrane component  34.48 
 
 
295 aa  130  2.0000000000000002e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.122805 
 
 
-
 
NC_010159  YpAngola_A4018  carbohydrate ABC transporter permease  31.33 
 
 
279 aa  129  6e-29  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8466  binding-protein-dependent transport systems inner membrane component  30.57 
 
 
315 aa  129  6e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.238012  normal  0.0506576 
 
 
-
 
NC_010465  YPK_3707  binding-protein-dependent transport systems inner membrane component  31.33 
 
 
279 aa  129  6e-29  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3573  carbohydrate ABC transporter permease  31.33 
 
 
279 aa  129  6e-29  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3649  binding-protein-dependent transport systems inner membrane component  31.34 
 
 
281 aa  129  7.000000000000001e-29  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0384109 
 
 
-
 
NC_013595  Sros_2192  putative sugar ABC transporter, permease protein  32.26 
 
 
283 aa  129  7.000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2001  binding-protein-dependent transport systems inner membrane component  31.75 
 
 
284 aa  128  9.000000000000001e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.757856  n/a   
 
 
-
 
NC_011886  Achl_3269  binding-protein-dependent transport systems inner membrane component  34.8 
 
 
301 aa  128  1.0000000000000001e-28  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_004116  SAG0036  sugar ABC transporter, permease protein  30.23 
 
 
276 aa  127  2.0000000000000002e-28  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.385725  n/a   
 
 
-
 
NC_007413  Ava_2094  binding-protein dependent transport system inner membrane protein  29.23 
 
 
279 aa  127  2.0000000000000002e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  0.179988  hitchhiker  0.00000184258 
 
 
-
 
NC_013131  Caci_3806  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
300 aa  127  2.0000000000000002e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007488  RSP_3943  ABC sugar transporter, inner membrane subunit  32.09 
 
 
281 aa  127  3e-28  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0114669  n/a   
 
 
-
 
NC_011071  Smal_2681  Monosaccharide-transporting ATPase  30.83 
 
 
278 aa  127  3e-28  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.515759  normal 
 
 
-
 
NC_011899  Hore_09510  binding-protein-dependent transport systems inner membrane component  27.06 
 
 
290 aa  126  3e-28  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000000548355  n/a   
 
 
-
 
NC_008726  Mvan_2542  binding-protein-dependent transport systems inner membrane component  27.37 
 
 
275 aa  126  3e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.607728  normal 
 
 
-
 
NC_013739  Cwoe_4881  binding-protein-dependent transport systems inner membrane component  30.57 
 
 
295 aa  126  5e-28  Conexibacter woesei DSM 14684  Bacteria  normal  0.48115  normal 
 
 
-
 
NC_011899  Hore_19870  binding-protein-dependent transport systems inner membrane component  29.6 
 
 
285 aa  125  7e-28  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3853  binding-protein-dependent transport systems inner membrane component  27.74 
 
 
275 aa  125  8.000000000000001e-28  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0623628 
 
 
-
 
NC_011661  Dtur_0383  binding-protein-dependent transport systems inner membrane component  28.02 
 
 
268 aa  124  1e-27  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2349  binding-protein-dependent transport systems inner membrane component  29.34 
 
 
283 aa  124  1e-27  Burkholderia phymatum STM815  Bacteria  normal  0.823442  normal  0.0985455 
 
 
-
 
NC_013526  Tter_2500  binding-protein-dependent transport systems inner membrane component  30.83 
 
 
277 aa  124  1e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4015  binding-protein-dependent transport systems inner membrane component  30.89 
 
 
278 aa  124  1e-27  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0700  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
279 aa  124  1e-27  Dickeya dadantii Ech703  Bacteria  normal  0.290838  n/a   
 
 
-
 
NC_009832  Spro_2524  binding-protein-dependent transport systems inner membrane component  32.86 
 
 
281 aa  124  1e-27  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2325  binding-protein-dependent transport systems inner membrane component  30 
 
 
283 aa  124  2e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011366  Rleg2_5850  binding-protein-dependent transport systems inner membrane component  30.4 
 
 
276 aa  124  2e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.590535  normal 
 
 
-
 
NC_013739  Cwoe_3955  binding-protein-dependent transport systems inner membrane component  32.24 
 
 
274 aa  124  2e-27  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_5332  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
297 aa  123  3e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.195165  normal  0.550162 
 
 
-
 
NC_012858  Rleg_6763  binding-protein-dependent transport systems inner membrane component  30.4 
 
 
276 aa  123  3e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.18605  normal 
 
 
-
 
NC_008541  Arth_1945  binding-protein-dependent transport systems inner membrane component  30.15 
 
 
271 aa  123  3e-27  Arthrobacter sp. FB24  Bacteria  normal  0.232263  n/a   
 
 
-
 
NC_010320  Teth514_0395  binding-protein-dependent transport systems inner membrane component  27.14 
 
 
277 aa  123  3e-27  Thermoanaerobacter sp. X514  Bacteria  normal  0.230637  n/a   
 
 
-
 
NC_007948  Bpro_0701  binding-protein-dependent transport systems inner membrane component  34.29 
 
 
315 aa  123  4e-27  Polaromonas sp. JS666  Bacteria  normal  0.338666  normal 
 
 
-
 
NC_013093  Amir_0401  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
273 aa  123  4e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0436  binding-protein-dependent transport systems inner membrane component  28.24 
 
 
284 aa  123  4e-27  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1117  binding-protein-dependent transport systems inner membrane component  24.7 
 
 
275 aa  123  4e-27  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4318  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
295 aa  122  5e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.574995  hitchhiker  0.00173435 
 
 
-
 
NC_013526  Tter_2701  binding-protein-dependent transport systems inner membrane component  29.96 
 
 
275 aa  122  6e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0563997  n/a   
 
 
-
 
NC_008043  TM1040_3485  binding-protein-dependent transport systems inner membrane component  30.08 
 
 
282 aa  122  6e-27  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0306  sugar ABC transporter, permease protein  30.77 
 
 
275 aa  122  7e-27  Brucella suis 1330  Bacteria  normal  0.147324  n/a   
 
 
-
 
NC_012669  Bcav_2601  binding-protein-dependent transport systems inner membrane component  27.69 
 
 
275 aa  122  7e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.260696  normal 
 
 
-
 
NC_009972  Haur_3639  monosaccharide-transporting ATPase  30.7 
 
 
292 aa  122  7e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR0237  sugar ABC transporter, permease protein  27.07 
 
 
291 aa  122  8e-27  Brucella suis 1330  Bacteria  normal  0.963709  n/a   
 
 
-
 
NC_009505  BOV_0230  sugar ABC transporter, permease protein  27.07 
 
 
291 aa  122  8e-27  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0754  binding-protein-dependent transport systems inner membrane component  33.61 
 
 
289 aa  122  9e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.467109  normal 
 
 
-
 
NC_011899  Hore_20610  binding-protein-dependent transport systems inner membrane component  27.45 
 
 
273 aa  122  9e-27  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0963  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
302 aa  122  9e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.341564  decreased coverage  0.00499995 
 
 
-
 
NC_009667  Oant_0311  binding-protein-dependent transport systems inner membrane component  27.44 
 
 
292 aa  121  9e-27  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.466995  n/a   
 
 
-
 
NC_007802  Jann_3555  binding-protein-dependent transport systems inner membrane component  29.91 
 
 
279 aa  121  9.999999999999999e-27  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0956  monosaccharide-transporting ATPase  28.12 
 
 
277 aa  121  9.999999999999999e-27  Petrotoga mobilis SJ95  Bacteria  normal  0.0922285  n/a   
 
 
-
 
NC_008346  Swol_0403  putative integral membrane transport protein  26.64 
 
 
279 aa  121  9.999999999999999e-27  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2301  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
285 aa  121  9.999999999999999e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.866945  n/a   
 
 
-
 
NC_013595  Sros_8234  maltose transport protein  31.6 
 
 
271 aa  121  9.999999999999999e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.367769  normal 
 
 
-
 
NC_008541  Arth_3685  binding-protein-dependent transport systems inner membrane component  31.5 
 
 
299 aa  121  9.999999999999999e-27  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_0205  binding-protein-dependent transport systems inner membrane component  30.29 
 
 
279 aa  121  9.999999999999999e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.67338  normal  0.16615 
 
 
-
 
NC_009620  Smed_4977  binding-protein-dependent transport systems inner membrane component  28.2 
 
 
288 aa  121  9.999999999999999e-27  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0547171 
 
 
-
 
NC_012028  Hlac_2864  binding-protein-dependent transport systems inner membrane component  28.36 
 
 
278 aa  121  9.999999999999999e-27  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_0887  sugar ABC transporter, permease protein  32.02 
 
 
280 aa  120  1.9999999999999998e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.453961  n/a   
 
 
-
 
NC_007760  Adeh_4134  ABC sugar transporter, inner membrane subunit  31.58 
 
 
295 aa  120  1.9999999999999998e-26  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4265  binding-protein-dependent transport systems inner membrane component  31.58 
 
 
293 aa  120  1.9999999999999998e-26  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1681  binding-protein-dependent transport systems inner membrane component  29.12 
 
 
267 aa  120  1.9999999999999998e-26  Thermotoga petrophila RKU-1  Bacteria  decreased coverage  0.0000000705466  n/a   
 
 
-
 
NC_009565  TBFG_12849  sn-glycerol-3-phosphate transport integral membrane protein ABC transporter ugpE  35.48 
 
 
275 aa  120  1.9999999999999998e-26  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000000144305  normal 
 
 
-
 
NC_011891  A2cp1_4287  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
293 aa  120  1.9999999999999998e-26  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4588  binding-protein-dependent transport systems inner membrane component  28.96 
 
 
283 aa  120  1.9999999999999998e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  0.165576  normal 
 
 
-
 
NC_008061  Bcen_4878  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
283 aa  120  3e-26  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_3287  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
283 aa  120  3e-26  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
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