| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1245 |
|---|
| Symbol | |
|---|
| ID | 5733153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 1451463 |
|---|
| End bp | 1452326 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641278385 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001544021 |
|---|
| Protein GI | 159897774 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.544041 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCC TACCAATTAA ATCTACCCTC AAAAAACCAC ATCAGGCTGG TTTTGGCCGC
TACTTGGTCT TGGCTGCACT GATTATTGCA GTGCTGGTGG TGCTGCTGCC CTTTGCAATT
GTGGTGATCA ATGCCTTCAA AACCCCGACT GATTATGCCA GCAACGGCCC GCTCAGTTGG
CCAAGCGCAT GGTCGATCGA TGGGATCGTT GAGTTTTGGC AGCGGGTCGA TTATAGCCAG
AAGTTGCTCA ATAGCTTGCT GATTAGCGCG AGCGTGGCGG TGATCGGCGT GCTGTTGTCG
TTGCTGAATG CCTTTGCGCT TGGGATTGGC CGCATCAAAG GCCGCGTTTG GCTGTTGATT
CTATTTATGG TTGCCAACAC CCTGCCCCAA GAATCACTGG TTTATCCGTT GTACTACCTC
TCCAAAGAAT TCGATCTCTA CAACACACGC TTTGTCGTGA TTTTGATTTT CTCAGTGATT
CAGAGCGCCT TTGGCACCTA TTTGCTCTCA TCGGTGTTCA GTACGTTTCC CAAAGAGATG
CTCGAAGCGG CAATGTTGGA TGGCTGCAAC AAACTGCAAC TCTTGTTTAA GATTATTGTT
CCGGTCAGCC GTCCAACCCT CTCGGTGCTC TTTACCTTCT TTTTCATCTG GACATGGAAC
GAATTTTTCT TGCCCTTGAT TTTGTTGATT AGCAACGATC GCCAAACGGT GCCGATTGCG
GTGGGCGTGC TGCAAGGCCA ACGCAACATG GAAGCCACCC TATCCAGTGC TTCAGCTTTG
TTGGGGATTC TGCCCTGCTT TATCTTCTTC CTAATCTTCC AACGCACCCT AACCAAAGGC
ATCGCCGCAG GTAGTGTGAA GTGA
|
|---|
| Protein sequence | MTSLPIKSTL KKPHQAGFGR YLVLAALIIA VLVVLLPFAI VVINAFKTPT DYASNGPLSW
PSAWSIDGIV EFWQRVDYSQ KLLNSLLISA SVAVIGVLLS LLNAFALGIG RIKGRVWLLI
LFMVANTLPQ ESLVYPLYYL SKEFDLYNTR FVVILIFSVI QSAFGTYLLS SVFSTFPKEM
LEAAMLDGCN KLQLLFKIIV PVSRPTLSVL FTFFFIWTWN EFFLPLILLI SNDRQTVPIA
VGVLQGQRNM EATLSSASAL LGILPCFIFF LIFQRTLTKG IAAGSVK
|
|---|
| |