Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_0700 |
Symbol | |
ID | 8089107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 791910 |
End bp | 792749 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644834772 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002986333 |
Protein GI | 242238152 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.290838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATGA AAACCTGGGA TCGCGTCGGC TGCGGCATTA TTTACGCCGC CGTGCTGATG GTGTTTGTCG GTCCCTTTCT GGGCATCATC ATGACCGCCC TCAGTGGCGT CACCGTCAAG CCGGGGGAAT TGGTGCTGTG GCCTCAGCAC TTTACGCTGG AGAATTTCCG CCGCGCGTGG CTGGAAGTCG GCGTCTGGAA GTACCTGCTG AACTCACTGT TGGTGGCCGG CGTCGGGCTG GTGTTTCAGG TCGCGGTGAG TTCGCTGGCG GCGTATGCGC TGGCGCGTAA GAAATTTCGC GGCGCGGCCA TTATCGGGCT GATTATCCTC TCCACCATGA TGCTGCCGGA GGAGGTGATC GCCATTCCGC TGTACGTGAT CATCAACTGG AAATTACCGC TGATCGACAT GTCTATTTCC AACAGCTATC TGGGGATGAT TCTGCCGATT GTCGGCTGGG CGTTTTCCAT CTTCGTGCTG AGCGAATTTA TGTCCGCCAT CCCGCGCGAT TTGGAGGATG CCGCCCGGGT GGACGGCGCG TCCGAGTGGC AGATTTTCTT CCATGTGATC CTGCCGCTGG TGCGCCCGGC GCTGGGTACG GTGGTGATTT TTGGTTTCAT CATGATTTGG GATCAGTACC TGTTGCCGTT GATCGTGGTG AACCAGGAGA GCATGTACAC CATTCAGGTG ATGCTGCGGG TGCTGAGTTC GGATGAAAAC AGTTCCCAGA ACGTGTTTAT CGCCATCACG CTGCTGGCGA TGCTGCCGAG CGCCATCGTC TATCTGGGTC TTCAGAAGTA TTTTAACCGC GGGCTGTTGT CCGGCGCGGT GAAAGGGTAA
|
Protein sequence | MKMKTWDRVG CGIIYAAVLM VFVGPFLGII MTALSGVTVK PGELVLWPQH FTLENFRRAW LEVGVWKYLL NSLLVAGVGL VFQVAVSSLA AYALARKKFR GAAIIGLIIL STMMLPEEVI AIPLYVIINW KLPLIDMSIS NSYLGMILPI VGWAFSIFVL SEFMSAIPRD LEDAARVDGA SEWQIFFHVI LPLVRPALGT VVIFGFIMIW DQYLLPLIVV NQESMYTIQV MLRVLSSDEN SSQNVFIAIT LLAMLPSAIV YLGLQKYFNR GLLSGAVKG
|
| |