Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1681 |
Symbol | |
ID | 5170104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1679093 |
End bp | 1679896 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640564207 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001245262 |
Protein GI | 148270802 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000705466 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAGAA AATTGTTCGT CATAATATTG TCAATTTTCT TCATGCTTCC AATCTTCTGG TCAATTACTT CTTCGTTTAA AGGAATAGGA GAAATTTTTT CTTACCCACC AACGTTTTTT CCGAAAAATC CTACCTTTGA GGGATACATA AAAGTGTTGA AAGAACATGA TTTCTTACTT TATCTCAGAA ACACTCTTTT CGTAGCGGTT GTGGCAACAC TTTTGACAGT TCCTGTGTGT TTGATGACCG GATACAGTTT GGCAAAAGGG ACTTTTAGAA GCAGAAAATT TTTCAACGGT CTCTTTGCGT GGACTCTGTT CATAACAGCA GAAGTCACAA TGGTTCCGCT CTTTATAGTT ATCAGAGGTT TGGGTCTGGT GAATTCCATA TGGGGTATGA TCATACCAGC TGTATACACC CCCACAGGTA CATTTGCTGC AGTCCAGTAT ATGAGAGATA TTCCCAATGA GCTCCTTGAG AGCGCAAAGA TAGATGGTGC AAACGAATGG CAGATTTTCT GGAGAATCGT TGTACCGCTT TCAAAACCAC TGATGGCCAC CCTTTCTATA TTCTCCTTCA CCTGGAGATG GAATGATTTT GTACTACCTC TCATCATTGT GAATAAGAAG AGTCTTTTCA CCTTGCAACT AGCTCTTGCC TCCATTCAAG AAGAGCTGGG GCCGTACGAT TGGACCGCTG TGCTCGCTTT TTCGAACCTT ACCGTGATTC CAACTCTCAT AATATTCCTG CTGTTCCAGA GATGGTTTAT GAGGGGTATC ATGACTGGTG GATTGAAATA TTGA
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Protein sequence | MGRKLFVIIL SIFFMLPIFW SITSSFKGIG EIFSYPPTFF PKNPTFEGYI KVLKEHDFLL YLRNTLFVAV VATLLTVPVC LMTGYSLAKG TFRSRKFFNG LFAWTLFITA EVTMVPLFIV IRGLGLVNSI WGMIIPAVYT PTGTFAAVQY MRDIPNELLE SAKIDGANEW QIFWRIVVPL SKPLMATLSI FSFTWRWNDF VLPLIIVNKK SLFTLQLALA SIQEELGPYD WTAVLAFSNL TVIPTLIIFL LFQRWFMRGI MTGGLKY
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